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Metabolomics integrated with machine learning to discriminate the geographic origin of Rougui Wuyi rock tea
The geographic origin of agri-food products contributes greatly to their quality and market value. Here, we developed a robust method combining metabolomics and machine learning (ML) to authenticate the geographic origin of Wuyi rock tea, a premium oolong tea. The volatiles of 333 tea samples (174 f...
Autores principales: | , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10020150/ https://www.ncbi.nlm.nih.gov/pubmed/36928372 http://dx.doi.org/10.1038/s41538-023-00187-1 |
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author | Peng, Yifei Zheng, Chao Guo, Shuang Gao, Fuquan Wang, Xiaxia Du, Zhenghua Gao, Feng Su, Feng Zhang, Wenjing Yu, Xueling Liu, Guoying Liu, Baoshun Wu, Chengjian Sun, Yun Yang, Zhenbiao Hao, Zhilong Yu, Xiaomin |
author_facet | Peng, Yifei Zheng, Chao Guo, Shuang Gao, Fuquan Wang, Xiaxia Du, Zhenghua Gao, Feng Su, Feng Zhang, Wenjing Yu, Xueling Liu, Guoying Liu, Baoshun Wu, Chengjian Sun, Yun Yang, Zhenbiao Hao, Zhilong Yu, Xiaomin |
author_sort | Peng, Yifei |
collection | PubMed |
description | The geographic origin of agri-food products contributes greatly to their quality and market value. Here, we developed a robust method combining metabolomics and machine learning (ML) to authenticate the geographic origin of Wuyi rock tea, a premium oolong tea. The volatiles of 333 tea samples (174 from the core region and 159 from the non-core region) were profiled using gas chromatography time-of-flight mass spectrometry and a series of ML algorithms were tested. Wuyi rock tea from the two regions featured distinct aroma profiles. Multilayer Perceptron achieved the best performance with an average accuracy of 92.7% on the training data using 176 volatile features. The model was benchmarked with two independent test sets, showing over 90% accuracy. Gradient Boosting algorithm yielded the best accuracy (89.6%) when using only 30 volatile features. The proposed methodology holds great promise for its broader applications in identifying the geographic origins of other valuable agri-food products. |
format | Online Article Text |
id | pubmed-10020150 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-100201502023-03-18 Metabolomics integrated with machine learning to discriminate the geographic origin of Rougui Wuyi rock tea Peng, Yifei Zheng, Chao Guo, Shuang Gao, Fuquan Wang, Xiaxia Du, Zhenghua Gao, Feng Su, Feng Zhang, Wenjing Yu, Xueling Liu, Guoying Liu, Baoshun Wu, Chengjian Sun, Yun Yang, Zhenbiao Hao, Zhilong Yu, Xiaomin NPJ Sci Food Article The geographic origin of agri-food products contributes greatly to their quality and market value. Here, we developed a robust method combining metabolomics and machine learning (ML) to authenticate the geographic origin of Wuyi rock tea, a premium oolong tea. The volatiles of 333 tea samples (174 from the core region and 159 from the non-core region) were profiled using gas chromatography time-of-flight mass spectrometry and a series of ML algorithms were tested. Wuyi rock tea from the two regions featured distinct aroma profiles. Multilayer Perceptron achieved the best performance with an average accuracy of 92.7% on the training data using 176 volatile features. The model was benchmarked with two independent test sets, showing over 90% accuracy. Gradient Boosting algorithm yielded the best accuracy (89.6%) when using only 30 volatile features. The proposed methodology holds great promise for its broader applications in identifying the geographic origins of other valuable agri-food products. Nature Publishing Group UK 2023-03-16 /pmc/articles/PMC10020150/ /pubmed/36928372 http://dx.doi.org/10.1038/s41538-023-00187-1 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Peng, Yifei Zheng, Chao Guo, Shuang Gao, Fuquan Wang, Xiaxia Du, Zhenghua Gao, Feng Su, Feng Zhang, Wenjing Yu, Xueling Liu, Guoying Liu, Baoshun Wu, Chengjian Sun, Yun Yang, Zhenbiao Hao, Zhilong Yu, Xiaomin Metabolomics integrated with machine learning to discriminate the geographic origin of Rougui Wuyi rock tea |
title | Metabolomics integrated with machine learning to discriminate the geographic origin of Rougui Wuyi rock tea |
title_full | Metabolomics integrated with machine learning to discriminate the geographic origin of Rougui Wuyi rock tea |
title_fullStr | Metabolomics integrated with machine learning to discriminate the geographic origin of Rougui Wuyi rock tea |
title_full_unstemmed | Metabolomics integrated with machine learning to discriminate the geographic origin of Rougui Wuyi rock tea |
title_short | Metabolomics integrated with machine learning to discriminate the geographic origin of Rougui Wuyi rock tea |
title_sort | metabolomics integrated with machine learning to discriminate the geographic origin of rougui wuyi rock tea |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10020150/ https://www.ncbi.nlm.nih.gov/pubmed/36928372 http://dx.doi.org/10.1038/s41538-023-00187-1 |
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