Cargando…

Identification of lactylation related model to predict prognostic, tumor infiltrating immunocytes and response of immunotherapy in gastric cancer

BACKGROUND: The epigenetic regulatory chemical lactate is a product of glycolysis. It can regulate gene expression through histone lactylation, thereby promoting tumor proliferation, metastasis, and immunosuppression. METHODS: In this study, a lactylation-related model for gastric cancer (GC) was co...

Descripción completa

Detalles Bibliográficos
Autores principales: Yang, Hao, Zou, Xiaoming, Yang, Shifeng, Zhang, Ange, Li, Nana, Ma, Zhen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10020516/
https://www.ncbi.nlm.nih.gov/pubmed/36936929
http://dx.doi.org/10.3389/fimmu.2023.1149989
_version_ 1784908274728960000
author Yang, Hao
Zou, Xiaoming
Yang, Shifeng
Zhang, Ange
Li, Nana
Ma, Zhen
author_facet Yang, Hao
Zou, Xiaoming
Yang, Shifeng
Zhang, Ange
Li, Nana
Ma, Zhen
author_sort Yang, Hao
collection PubMed
description BACKGROUND: The epigenetic regulatory chemical lactate is a product of glycolysis. It can regulate gene expression through histone lactylation, thereby promoting tumor proliferation, metastasis, and immunosuppression. METHODS: In this study, a lactylation-related model for gastric cancer (GC) was constructed, and its relationships to prognosis, immune cell infiltration, and immunotherapy were investigated. By contrasting normal tissues and tumor tissues, four lactylation-related pathways that were substantially expressed in GC tissues were found in the GSEA database. Six lactylation-related genes were screened for bioinformatic analysis. The GC data sets from the TCGA and GEO databases were downloaded and integrated to perform cluster analysis, and the lactylation related model was constructed by secondary clustering. RESULTS: The fingding demonstrated that the lactylation score has a strong correlation with the overall survival rate from GC and the progression of GC. Mechanistic experiments showed that abundant immune cell infiltration (macrophages showed the highest degree of infiltration) and increased genetic instability are traits of high lactylation scores. Immune checkpoint inhibitors (ICIs) demonstrated a reduced response rate in GC with high lactylation scores. At the same time, tumors with high lactylation scores had high Tumor Immune Dysfunction and Exclusion scores, which means that they had a higher risk of immune evasion and dysfunction. DISCUSSION: These findings indicate that the lactylation score can be used to predict the malignant progression and immune evasion of GC. This model also can guide the treatment response to ICIs of GC. The constructed model of the lactate gene is also expected to become a potential therapeutic target for GC and diagnostic marker.
format Online
Article
Text
id pubmed-10020516
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-100205162023-03-18 Identification of lactylation related model to predict prognostic, tumor infiltrating immunocytes and response of immunotherapy in gastric cancer Yang, Hao Zou, Xiaoming Yang, Shifeng Zhang, Ange Li, Nana Ma, Zhen Front Immunol Immunology BACKGROUND: The epigenetic regulatory chemical lactate is a product of glycolysis. It can regulate gene expression through histone lactylation, thereby promoting tumor proliferation, metastasis, and immunosuppression. METHODS: In this study, a lactylation-related model for gastric cancer (GC) was constructed, and its relationships to prognosis, immune cell infiltration, and immunotherapy were investigated. By contrasting normal tissues and tumor tissues, four lactylation-related pathways that were substantially expressed in GC tissues were found in the GSEA database. Six lactylation-related genes were screened for bioinformatic analysis. The GC data sets from the TCGA and GEO databases were downloaded and integrated to perform cluster analysis, and the lactylation related model was constructed by secondary clustering. RESULTS: The fingding demonstrated that the lactylation score has a strong correlation with the overall survival rate from GC and the progression of GC. Mechanistic experiments showed that abundant immune cell infiltration (macrophages showed the highest degree of infiltration) and increased genetic instability are traits of high lactylation scores. Immune checkpoint inhibitors (ICIs) demonstrated a reduced response rate in GC with high lactylation scores. At the same time, tumors with high lactylation scores had high Tumor Immune Dysfunction and Exclusion scores, which means that they had a higher risk of immune evasion and dysfunction. DISCUSSION: These findings indicate that the lactylation score can be used to predict the malignant progression and immune evasion of GC. This model also can guide the treatment response to ICIs of GC. The constructed model of the lactate gene is also expected to become a potential therapeutic target for GC and diagnostic marker. Frontiers Media S.A. 2023-03-03 /pmc/articles/PMC10020516/ /pubmed/36936929 http://dx.doi.org/10.3389/fimmu.2023.1149989 Text en Copyright © 2023 Yang, Zou, Yang, Zhang, Li and Ma https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Immunology
Yang, Hao
Zou, Xiaoming
Yang, Shifeng
Zhang, Ange
Li, Nana
Ma, Zhen
Identification of lactylation related model to predict prognostic, tumor infiltrating immunocytes and response of immunotherapy in gastric cancer
title Identification of lactylation related model to predict prognostic, tumor infiltrating immunocytes and response of immunotherapy in gastric cancer
title_full Identification of lactylation related model to predict prognostic, tumor infiltrating immunocytes and response of immunotherapy in gastric cancer
title_fullStr Identification of lactylation related model to predict prognostic, tumor infiltrating immunocytes and response of immunotherapy in gastric cancer
title_full_unstemmed Identification of lactylation related model to predict prognostic, tumor infiltrating immunocytes and response of immunotherapy in gastric cancer
title_short Identification of lactylation related model to predict prognostic, tumor infiltrating immunocytes and response of immunotherapy in gastric cancer
title_sort identification of lactylation related model to predict prognostic, tumor infiltrating immunocytes and response of immunotherapy in gastric cancer
topic Immunology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10020516/
https://www.ncbi.nlm.nih.gov/pubmed/36936929
http://dx.doi.org/10.3389/fimmu.2023.1149989
work_keys_str_mv AT yanghao identificationoflactylationrelatedmodeltopredictprognostictumorinfiltratingimmunocytesandresponseofimmunotherapyingastriccancer
AT zouxiaoming identificationoflactylationrelatedmodeltopredictprognostictumorinfiltratingimmunocytesandresponseofimmunotherapyingastriccancer
AT yangshifeng identificationoflactylationrelatedmodeltopredictprognostictumorinfiltratingimmunocytesandresponseofimmunotherapyingastriccancer
AT zhangange identificationoflactylationrelatedmodeltopredictprognostictumorinfiltratingimmunocytesandresponseofimmunotherapyingastriccancer
AT linana identificationoflactylationrelatedmodeltopredictprognostictumorinfiltratingimmunocytesandresponseofimmunotherapyingastriccancer
AT mazhen identificationoflactylationrelatedmodeltopredictprognostictumorinfiltratingimmunocytesandresponseofimmunotherapyingastriccancer