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Feasibility of a deep-learning based anatomical region labeling tool for Cone-Beam Computed Tomography scans in radiotherapy
BACKGROUND AND PURPOSE: Currently, there is no robust indicator within the Cone-Beam Computed Tomography (CBCT) DICOM headers as to which anatomical region is present on the scan. This can be a predicament to CBCT-based algorithms trained on specific body regions, such as auto-segmentation and radio...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10020677/ https://www.ncbi.nlm.nih.gov/pubmed/36937493 http://dx.doi.org/10.1016/j.phro.2023.100427 |
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author | Luximon, Dishane C Neylon, John Lamb, James M |
author_facet | Luximon, Dishane C Neylon, John Lamb, James M |
author_sort | Luximon, Dishane C |
collection | PubMed |
description | BACKGROUND AND PURPOSE: Currently, there is no robust indicator within the Cone-Beam Computed Tomography (CBCT) DICOM headers as to which anatomical region is present on the scan. This can be a predicament to CBCT-based algorithms trained on specific body regions, such as auto-segmentation and radiomics tools used in the radiotherapy workflow. We propose an anatomical region labeling (ARL) algorithm to classify CBCT scans into four distinct regions: head & neck, thoracic-abdominal, pelvis, and extremity. MATERIALS AND METHODS: Algorithm training and testing was performed on 3,802 CBCT scans from 596 patients treated at our radiotherapy center. The ARL model, which consists of a convolutional neural network, makes use of a single CBCT coronal slice to output a probability of occurrence for each of the four classes. ARL was evaluated on the test dataset composed of 1,090 scans and compared to a support vector machine (SVM) model. ARL was also used to label CBCT treatment scans for 22 consecutive days as part of a proof-of-concept implementation. A validation study was performed on the first 100 unique patient scans to evaluate the functionality of the tool in the clinical setting. RESULTS: ARL achieved an overall accuracy of 99.2% on the test dataset, outperforming the SVM (91.5% accuracy). Our validation study has shown strong agreement between the human annotations and ARL predictions, with accuracies of 99.0% for all four regions. CONCLUSION: The high classification accuracy demonstrated by ARL suggests that it may be employed as a pre-processing step for site-specific, CBCT-based radiotherapy tools. |
format | Online Article Text |
id | pubmed-10020677 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-100206772023-03-18 Feasibility of a deep-learning based anatomical region labeling tool for Cone-Beam Computed Tomography scans in radiotherapy Luximon, Dishane C Neylon, John Lamb, James M Phys Imaging Radiat Oncol Original Research Article BACKGROUND AND PURPOSE: Currently, there is no robust indicator within the Cone-Beam Computed Tomography (CBCT) DICOM headers as to which anatomical region is present on the scan. This can be a predicament to CBCT-based algorithms trained on specific body regions, such as auto-segmentation and radiomics tools used in the radiotherapy workflow. We propose an anatomical region labeling (ARL) algorithm to classify CBCT scans into four distinct regions: head & neck, thoracic-abdominal, pelvis, and extremity. MATERIALS AND METHODS: Algorithm training and testing was performed on 3,802 CBCT scans from 596 patients treated at our radiotherapy center. The ARL model, which consists of a convolutional neural network, makes use of a single CBCT coronal slice to output a probability of occurrence for each of the four classes. ARL was evaluated on the test dataset composed of 1,090 scans and compared to a support vector machine (SVM) model. ARL was also used to label CBCT treatment scans for 22 consecutive days as part of a proof-of-concept implementation. A validation study was performed on the first 100 unique patient scans to evaluate the functionality of the tool in the clinical setting. RESULTS: ARL achieved an overall accuracy of 99.2% on the test dataset, outperforming the SVM (91.5% accuracy). Our validation study has shown strong agreement between the human annotations and ARL predictions, with accuracies of 99.0% for all four regions. CONCLUSION: The high classification accuracy demonstrated by ARL suggests that it may be employed as a pre-processing step for site-specific, CBCT-based radiotherapy tools. Elsevier 2023-03-05 /pmc/articles/PMC10020677/ /pubmed/36937493 http://dx.doi.org/10.1016/j.phro.2023.100427 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Original Research Article Luximon, Dishane C Neylon, John Lamb, James M Feasibility of a deep-learning based anatomical region labeling tool for Cone-Beam Computed Tomography scans in radiotherapy |
title | Feasibility of a deep-learning based anatomical region labeling tool for Cone-Beam Computed Tomography scans in radiotherapy |
title_full | Feasibility of a deep-learning based anatomical region labeling tool for Cone-Beam Computed Tomography scans in radiotherapy |
title_fullStr | Feasibility of a deep-learning based anatomical region labeling tool for Cone-Beam Computed Tomography scans in radiotherapy |
title_full_unstemmed | Feasibility of a deep-learning based anatomical region labeling tool for Cone-Beam Computed Tomography scans in radiotherapy |
title_short | Feasibility of a deep-learning based anatomical region labeling tool for Cone-Beam Computed Tomography scans in radiotherapy |
title_sort | feasibility of a deep-learning based anatomical region labeling tool for cone-beam computed tomography scans in radiotherapy |
topic | Original Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10020677/ https://www.ncbi.nlm.nih.gov/pubmed/36937493 http://dx.doi.org/10.1016/j.phro.2023.100427 |
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