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What If…? Pandemic policy-decision-support to guide a cost-benefit-optimised, country-specific response

BACKGROUND: After 18 months of responding to the COVID-19 pandemic, there is still no agreement on the optimal combination of mitigation strategies. The efficacy and collateral damage of pandemic policies are dependent on constantly evolving viral epidemiology as well as the volatile distribution of...

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Autores principales: Mannarini, Giorgio, Posa, Francesco, Bossy, Thierry, Massemin, Lucas, Fernandez-Castanon, Javier, Chavdarova, Tatjana, Cañas, Pablo, Gupta, Prakhar, Jaggi, Martin, Hartley, Mary-Anne
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10022143/
https://www.ncbi.nlm.nih.gov/pubmed/36962770
http://dx.doi.org/10.1371/journal.pgph.0000721
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author Mannarini, Giorgio
Posa, Francesco
Bossy, Thierry
Massemin, Lucas
Fernandez-Castanon, Javier
Chavdarova, Tatjana
Cañas, Pablo
Gupta, Prakhar
Jaggi, Martin
Hartley, Mary-Anne
author_facet Mannarini, Giorgio
Posa, Francesco
Bossy, Thierry
Massemin, Lucas
Fernandez-Castanon, Javier
Chavdarova, Tatjana
Cañas, Pablo
Gupta, Prakhar
Jaggi, Martin
Hartley, Mary-Anne
author_sort Mannarini, Giorgio
collection PubMed
description BACKGROUND: After 18 months of responding to the COVID-19 pandemic, there is still no agreement on the optimal combination of mitigation strategies. The efficacy and collateral damage of pandemic policies are dependent on constantly evolving viral epidemiology as well as the volatile distribution of socioeconomic and cultural factors. This study proposes a data-driven approach to quantify the efficacy of the type, duration, and stringency of COVID-19 mitigation policies in terms of transmission control and economic loss, personalised to individual countries. METHODS: We present What If…?, a deep learning pandemic-policy-decision-support algorithm simulating pandemic scenarios to guide and evaluate policy impact in real time. It leverages a uniquely diverse live global data-stream of socioeconomic, demographic, climatic, and epidemic trends on over a year of data (04/2020–06/2021) from 116 countries. The economic damage of the policies is also evaluated on the 29 higher income countries for which data is available. The efficacy and economic damage estimates are derived from two neural networks that infer respectively the daily R-value (R(E)) and unemployment rate (UER). Reinforcement learning then pits these models against each other to find the optimal policies minimising both R(E) and UER. FINDINGS: The models made high accuracy predictions of R(E) and UER (average mean squared errors of 0.043 [CI95: 0.042–0.044] and 4.473% [CI95: 2.619–6.326] respectively), which allow the computation of country-specific policy efficacy in terms of cost and benefit. In the 29 countries where economic information was available, the reinforcement learning agent suggested a policy mix that is predicted to outperform those implemented in reality by over 10-fold for R(E) reduction (0.250 versus 0.025) and at 28-fold less cost in terms of UER (1.595% versus 0.057%). CONCLUSION: These results show that deep learning has the potential to guide evidence-based understanding and implementation of public health policies.
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spelling pubmed-100221432023-03-17 What If…? Pandemic policy-decision-support to guide a cost-benefit-optimised, country-specific response Mannarini, Giorgio Posa, Francesco Bossy, Thierry Massemin, Lucas Fernandez-Castanon, Javier Chavdarova, Tatjana Cañas, Pablo Gupta, Prakhar Jaggi, Martin Hartley, Mary-Anne PLOS Glob Public Health Research Article BACKGROUND: After 18 months of responding to the COVID-19 pandemic, there is still no agreement on the optimal combination of mitigation strategies. The efficacy and collateral damage of pandemic policies are dependent on constantly evolving viral epidemiology as well as the volatile distribution of socioeconomic and cultural factors. This study proposes a data-driven approach to quantify the efficacy of the type, duration, and stringency of COVID-19 mitigation policies in terms of transmission control and economic loss, personalised to individual countries. METHODS: We present What If…?, a deep learning pandemic-policy-decision-support algorithm simulating pandemic scenarios to guide and evaluate policy impact in real time. It leverages a uniquely diverse live global data-stream of socioeconomic, demographic, climatic, and epidemic trends on over a year of data (04/2020–06/2021) from 116 countries. The economic damage of the policies is also evaluated on the 29 higher income countries for which data is available. The efficacy and economic damage estimates are derived from two neural networks that infer respectively the daily R-value (R(E)) and unemployment rate (UER). Reinforcement learning then pits these models against each other to find the optimal policies minimising both R(E) and UER. FINDINGS: The models made high accuracy predictions of R(E) and UER (average mean squared errors of 0.043 [CI95: 0.042–0.044] and 4.473% [CI95: 2.619–6.326] respectively), which allow the computation of country-specific policy efficacy in terms of cost and benefit. In the 29 countries where economic information was available, the reinforcement learning agent suggested a policy mix that is predicted to outperform those implemented in reality by over 10-fold for R(E) reduction (0.250 versus 0.025) and at 28-fold less cost in terms of UER (1.595% versus 0.057%). CONCLUSION: These results show that deep learning has the potential to guide evidence-based understanding and implementation of public health policies. Public Library of Science 2022-08-24 /pmc/articles/PMC10022143/ /pubmed/36962770 http://dx.doi.org/10.1371/journal.pgph.0000721 Text en © 2022 Mannarini et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Mannarini, Giorgio
Posa, Francesco
Bossy, Thierry
Massemin, Lucas
Fernandez-Castanon, Javier
Chavdarova, Tatjana
Cañas, Pablo
Gupta, Prakhar
Jaggi, Martin
Hartley, Mary-Anne
What If…? Pandemic policy-decision-support to guide a cost-benefit-optimised, country-specific response
title What If…? Pandemic policy-decision-support to guide a cost-benefit-optimised, country-specific response
title_full What If…? Pandemic policy-decision-support to guide a cost-benefit-optimised, country-specific response
title_fullStr What If…? Pandemic policy-decision-support to guide a cost-benefit-optimised, country-specific response
title_full_unstemmed What If…? Pandemic policy-decision-support to guide a cost-benefit-optimised, country-specific response
title_short What If…? Pandemic policy-decision-support to guide a cost-benefit-optimised, country-specific response
title_sort what if…? pandemic policy-decision-support to guide a cost-benefit-optimised, country-specific response
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10022143/
https://www.ncbi.nlm.nih.gov/pubmed/36962770
http://dx.doi.org/10.1371/journal.pgph.0000721
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