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Comparative study of convolutional neural network architectures for gastrointestinal lesions classification
The gastrointestinal (GI) tract can be affected by different diseases or lesions such as esophagitis, ulcers, hemorrhoids, and polyps, among others. Some of them can be precursors of cancer such as polyps. Endoscopy is the standard procedure for the detection of these lesions. The main drawback of t...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10024900/ https://www.ncbi.nlm.nih.gov/pubmed/36945355 http://dx.doi.org/10.7717/peerj.14806 |
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author | Cuevas-Rodriguez, Erik O. Galvan-Tejada, Carlos E. Maeda-Gutiérrez, Valeria Moreno-Chávez, Gamaliel Galván-Tejada, Jorge I. Gamboa-Rosales, Hamurabi Luna-García, Huizilopoztli Moreno-Baez, Arturo Celaya-Padilla, José María |
author_facet | Cuevas-Rodriguez, Erik O. Galvan-Tejada, Carlos E. Maeda-Gutiérrez, Valeria Moreno-Chávez, Gamaliel Galván-Tejada, Jorge I. Gamboa-Rosales, Hamurabi Luna-García, Huizilopoztli Moreno-Baez, Arturo Celaya-Padilla, José María |
author_sort | Cuevas-Rodriguez, Erik O. |
collection | PubMed |
description | The gastrointestinal (GI) tract can be affected by different diseases or lesions such as esophagitis, ulcers, hemorrhoids, and polyps, among others. Some of them can be precursors of cancer such as polyps. Endoscopy is the standard procedure for the detection of these lesions. The main drawback of this procedure is that the diagnosis depends on the expertise of the doctor. This means that some important findings may be missed. In recent years, this problem has been addressed by deep learning (DL) techniques. Endoscopic studies use digital images. The most widely used DL technique for image processing is the convolutional neural network (CNN) due to its high accuracy for modeling complex phenomena. There are different CNNs that are characterized by their architecture. In this article, four architectures are compared: AlexNet, DenseNet-201, Inception-v3, and ResNet-101. To determine which architecture best classifies GI tract lesions, a set of metrics; accuracy, precision, sensitivity, specificity, F1-score, and area under the curve (AUC) were used. These architectures were trained and tested on the HyperKvasir dataset. From this dataset, a total of 6,792 images corresponding to 10 findings were used. A transfer learning approach and a data augmentation technique were applied. The best performing architecture was DenseNet-201, whose results were: 97.11% of accuracy, 96.3% sensitivity, 99.67% specificity, and 95% AUC. |
format | Online Article Text |
id | pubmed-10024900 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-100249002023-03-20 Comparative study of convolutional neural network architectures for gastrointestinal lesions classification Cuevas-Rodriguez, Erik O. Galvan-Tejada, Carlos E. Maeda-Gutiérrez, Valeria Moreno-Chávez, Gamaliel Galván-Tejada, Jorge I. Gamboa-Rosales, Hamurabi Luna-García, Huizilopoztli Moreno-Baez, Arturo Celaya-Padilla, José María PeerJ Gastroenterology and Hepatology The gastrointestinal (GI) tract can be affected by different diseases or lesions such as esophagitis, ulcers, hemorrhoids, and polyps, among others. Some of them can be precursors of cancer such as polyps. Endoscopy is the standard procedure for the detection of these lesions. The main drawback of this procedure is that the diagnosis depends on the expertise of the doctor. This means that some important findings may be missed. In recent years, this problem has been addressed by deep learning (DL) techniques. Endoscopic studies use digital images. The most widely used DL technique for image processing is the convolutional neural network (CNN) due to its high accuracy for modeling complex phenomena. There are different CNNs that are characterized by their architecture. In this article, four architectures are compared: AlexNet, DenseNet-201, Inception-v3, and ResNet-101. To determine which architecture best classifies GI tract lesions, a set of metrics; accuracy, precision, sensitivity, specificity, F1-score, and area under the curve (AUC) were used. These architectures were trained and tested on the HyperKvasir dataset. From this dataset, a total of 6,792 images corresponding to 10 findings were used. A transfer learning approach and a data augmentation technique were applied. The best performing architecture was DenseNet-201, whose results were: 97.11% of accuracy, 96.3% sensitivity, 99.67% specificity, and 95% AUC. PeerJ Inc. 2023-03-16 /pmc/articles/PMC10024900/ /pubmed/36945355 http://dx.doi.org/10.7717/peerj.14806 Text en © 2023 Cuevas-Rodriguez et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Gastroenterology and Hepatology Cuevas-Rodriguez, Erik O. Galvan-Tejada, Carlos E. Maeda-Gutiérrez, Valeria Moreno-Chávez, Gamaliel Galván-Tejada, Jorge I. Gamboa-Rosales, Hamurabi Luna-García, Huizilopoztli Moreno-Baez, Arturo Celaya-Padilla, José María Comparative study of convolutional neural network architectures for gastrointestinal lesions classification |
title | Comparative study of convolutional neural network architectures for gastrointestinal lesions classification |
title_full | Comparative study of convolutional neural network architectures for gastrointestinal lesions classification |
title_fullStr | Comparative study of convolutional neural network architectures for gastrointestinal lesions classification |
title_full_unstemmed | Comparative study of convolutional neural network architectures for gastrointestinal lesions classification |
title_short | Comparative study of convolutional neural network architectures for gastrointestinal lesions classification |
title_sort | comparative study of convolutional neural network architectures for gastrointestinal lesions classification |
topic | Gastroenterology and Hepatology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10024900/ https://www.ncbi.nlm.nih.gov/pubmed/36945355 http://dx.doi.org/10.7717/peerj.14806 |
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