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Developing and Validating Models to Predict Progression to Proliferative Diabetic Retinopathy

PURPOSE: To develop models for progression of nonproliferative diabetic retinopathy (NPDR) to proliferative diabetic retinopathy (PDR) and determine if incorporating updated information improves model performance. DESIGN: Retrospective cohort study. PARTICIPANTS: Electronic health record (EHR) data...

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Autores principales: Guo, Yian, Yonamine, Sean, Jian Ma, Chu, Stewart, Jay M., Acharya, Nisha, Arnold, Benjamin F., McCulloch, Charles, Sun, Catherine Q.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10025270/
https://www.ncbi.nlm.nih.gov/pubmed/36950087
http://dx.doi.org/10.1016/j.xops.2023.100276
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author Guo, Yian
Yonamine, Sean
Jian Ma, Chu
Stewart, Jay M.
Acharya, Nisha
Arnold, Benjamin F.
McCulloch, Charles
Sun, Catherine Q.
author_facet Guo, Yian
Yonamine, Sean
Jian Ma, Chu
Stewart, Jay M.
Acharya, Nisha
Arnold, Benjamin F.
McCulloch, Charles
Sun, Catherine Q.
author_sort Guo, Yian
collection PubMed
description PURPOSE: To develop models for progression of nonproliferative diabetic retinopathy (NPDR) to proliferative diabetic retinopathy (PDR) and determine if incorporating updated information improves model performance. DESIGN: Retrospective cohort study. PARTICIPANTS: Electronic health record (EHR) data from a tertiary academic center, University of California San Francisco (UCSF), and a safety-net hospital, Zuckerberg San Francisco General (ZSFG) Hospital were used to identify patients with a diagnosis of NPDR, age ≥ 18 years, a diagnosis of type 1 or 2 diabetes mellitus, ≥ 6 months of ophthalmology follow-up, and no prior diagnosis of PDR before the index date (date of first NPDR diagnosis in the EHR). METHODS: Four survival models were developed: Cox proportional hazards, Cox with backward selection, Cox with LASSO regression and Random Survival Forest. For each model, three variable sets were compared to determine the impact of including updated clinical information: Static(0) (data up to the index date), Static(6m) (data updated 6 months after the index date), and Dynamic (data in Static(0) plus data change during the 6-month period). The UCSF data were split into 80% training and 20% testing (internal validation). The ZSFG data were used for external validation. Model performance was evaluated by the Harrell’s concordance index (C-Index). MAIN OUTCOME MEASURES: Time to PDR. RESULTS: The UCSF cohort included 1130 patients and 92 (8.1%) patients progressed to PDR. The ZSFG cohort included 687 patients and 30 (4.4%) patients progressed to PDR. All models performed similarly (C-indices ∼ 0.70) in internal validation. The random survival forest with Static(6m) set performed best in external validation (C-index 0.76). Insurance and age were selected or ranked as highly important by all models. Other key predictors were NPDR severity, diabetic neuropathy, number of strokes, mean Hemoglobin A1c, and number of hospital admissions. CONCLUSIONS: Our models for progression of NPDR to PDR achieved acceptable predictive performance and validated well in an external setting. Updating the baseline variables with new clinical information did not consistently improve the predictive performance. FINANCIAL DISCLOSURE(S): Proprietary or commercial disclosure may be found after the references.
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spelling pubmed-100252702023-03-21 Developing and Validating Models to Predict Progression to Proliferative Diabetic Retinopathy Guo, Yian Yonamine, Sean Jian Ma, Chu Stewart, Jay M. Acharya, Nisha Arnold, Benjamin F. McCulloch, Charles Sun, Catherine Q. Ophthalmol Sci Original Article PURPOSE: To develop models for progression of nonproliferative diabetic retinopathy (NPDR) to proliferative diabetic retinopathy (PDR) and determine if incorporating updated information improves model performance. DESIGN: Retrospective cohort study. PARTICIPANTS: Electronic health record (EHR) data from a tertiary academic center, University of California San Francisco (UCSF), and a safety-net hospital, Zuckerberg San Francisco General (ZSFG) Hospital were used to identify patients with a diagnosis of NPDR, age ≥ 18 years, a diagnosis of type 1 or 2 diabetes mellitus, ≥ 6 months of ophthalmology follow-up, and no prior diagnosis of PDR before the index date (date of first NPDR diagnosis in the EHR). METHODS: Four survival models were developed: Cox proportional hazards, Cox with backward selection, Cox with LASSO regression and Random Survival Forest. For each model, three variable sets were compared to determine the impact of including updated clinical information: Static(0) (data up to the index date), Static(6m) (data updated 6 months after the index date), and Dynamic (data in Static(0) plus data change during the 6-month period). The UCSF data were split into 80% training and 20% testing (internal validation). The ZSFG data were used for external validation. Model performance was evaluated by the Harrell’s concordance index (C-Index). MAIN OUTCOME MEASURES: Time to PDR. RESULTS: The UCSF cohort included 1130 patients and 92 (8.1%) patients progressed to PDR. The ZSFG cohort included 687 patients and 30 (4.4%) patients progressed to PDR. All models performed similarly (C-indices ∼ 0.70) in internal validation. The random survival forest with Static(6m) set performed best in external validation (C-index 0.76). Insurance and age were selected or ranked as highly important by all models. Other key predictors were NPDR severity, diabetic neuropathy, number of strokes, mean Hemoglobin A1c, and number of hospital admissions. CONCLUSIONS: Our models for progression of NPDR to PDR achieved acceptable predictive performance and validated well in an external setting. Updating the baseline variables with new clinical information did not consistently improve the predictive performance. FINANCIAL DISCLOSURE(S): Proprietary or commercial disclosure may be found after the references. Elsevier 2023-02-01 /pmc/articles/PMC10025270/ /pubmed/36950087 http://dx.doi.org/10.1016/j.xops.2023.100276 Text en © 2023 Published by Elsevier Inc. on behalf of American Academy of Ophthalmology. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Original Article
Guo, Yian
Yonamine, Sean
Jian Ma, Chu
Stewart, Jay M.
Acharya, Nisha
Arnold, Benjamin F.
McCulloch, Charles
Sun, Catherine Q.
Developing and Validating Models to Predict Progression to Proliferative Diabetic Retinopathy
title Developing and Validating Models to Predict Progression to Proliferative Diabetic Retinopathy
title_full Developing and Validating Models to Predict Progression to Proliferative Diabetic Retinopathy
title_fullStr Developing and Validating Models to Predict Progression to Proliferative Diabetic Retinopathy
title_full_unstemmed Developing and Validating Models to Predict Progression to Proliferative Diabetic Retinopathy
title_short Developing and Validating Models to Predict Progression to Proliferative Diabetic Retinopathy
title_sort developing and validating models to predict progression to proliferative diabetic retinopathy
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10025270/
https://www.ncbi.nlm.nih.gov/pubmed/36950087
http://dx.doi.org/10.1016/j.xops.2023.100276
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