Cargando…

FAMetA: a mass isotopologue-based tool for the comprehensive analysis of fatty acid metabolism

The use of stable isotope tracers and mass spectrometry (MS) is the gold standard method for the analysis of fatty acid (FA) metabolism. Yet, current state-of-the-art tools provide limited and difficult-to-interpret information about FA biosynthetic routes. Here we present FAMetA, an R package and a...

Descripción completa

Detalles Bibliográficos
Autores principales:	Alcoriza-Balaguer, María I, García-Cañaveras, Juan C, Benet, Marta, Juan-Vidal, Oscar, Lahoz, Agustín
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2023
Materias:	Problem Solving Protocol
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10025582/ https://www.ncbi.nlm.nih.gov/pubmed/36857618 http://dx.doi.org/10.1093/bib/bbad064

Ejemplares similares

Comprehensive evaluation of peptide de novo sequencing tools for monoclonal antibody assembly
por: Beslic, Denis, et al.
Publicado: (2022)

CysModDB: a comprehensive platform with the integration of manually curated resources and analysis tools for cysteine posttranslational modifications
por: Meng, Yanzheng, et al.
Publicado: (2022)

Comprehensive assessment of cellular senescence in the tumor microenvironment
por: Wang, Xiaoman, et al.
Publicado: (2022)

Comprehensive evaluation of computational methods for predicting cancer driver genes
por: Shi, Xiaohui, et al.
Publicado: (2022)

Comprehensive evaluation of methods for differential expression analysis of metatranscriptomics data
por: Cho, Hunyong, et al.
Publicado: (2023)

A comprehensive method protocol for annotation and integrated functional understanding of lncRNAs
por: Kunz, Meik, et al.
Publicado: (2019)

Updates to HCOP: the HGNC comparison of orthology predictions tool
por: Yates, Bethan, et al.
Publicado: (2021)

Unveiling human origins of replication using deep learning: accurate prediction and comprehensive analysis
por: Yin, Zhen-Ning, et al.
Publicado: (2023)

CoverageMaster: comprehensive CNV detection and visualization from NGS short reads for genetic medicine applications
por: Rapti, Melivoia, et al.
Publicado: (2022)

MkcDBGAS: a reference-free approach to identify comprehensive alternative splicing events in a transcriptome
por: Zhang, Quanbao, et al.
Publicado: (2023)

Tools for fundamental analysis functions of TCR repertoires: a systematic comparison
por: Zhang, Yanfang, et al.
Publicado: (2019)

SBGN Bricks Ontology as a tool to describe recurring concepts in molecular networks
por: Rougny, Adrien, et al.
Publicado: (2021)

HMMPolish: a coding region polishing tool for TGS-sequenced RNA viruses
por: Yu, Runzhou, et al.
Publicado: (2023)

Investigations of sequencing data and sample type on HLA class Ia typing with different computational tools
por: Yi, Jian, et al.
Publicado: (2020)

RiboReport - benchmarking tools for ribosome profiling-based identification of open reading frames in bacteria
por: Gelhausen, Rick, et al.
Publicado: (2022)

A comparative study of multi-omics integration tools for cancer driver gene identification and tumour subtyping
por: Sathyanarayanan, Anita, et al.
Publicado: (2019)

VIPPID: a gene-specific single nucleotide variant pathogenicity prediction tool for primary immunodeficiency diseases
por: Fang, Mingyan, et al.
Publicado: (2022)

MolAICal: a soft tool for 3D drug design of protein targets by artificial intelligence and classical algorithm
por: Bai, Qifeng, et al.
Publicado: (2020)

slORFfinder: a tool to detect open reading frames resulting from trans-splicing of spliced leader sequences
por: Song, Bo, et al.
Publicado: (2023)

Predicting protein stability changes upon single-point mutation: a thorough comparison of the available tools on a new dataset
por: Pancotti, Corrado, et al.
Publicado: (2022)

ResNetKhib: a novel cell type-specific tool for predicting lysine 2-hydroxyisobutylation sites via transfer learning
por: Jia, Xiaoti, et al.
Publicado: (2023)

PedMiner: a tool for linkage analysis-based identification of disease-associated variants using family based whole-exome sequencing data
por: Zhou, Jianteng, et al.
Publicado: (2020)

An interpretable single-cell RNA sequencing data clustering method based on latent Dirichlet allocation
por: Yang, Qi, et al.
Publicado: (2023)

Deciphering signatures of natural selection via deep learning
por: Qin, Xinghu, et al.
Publicado: (2022)

KLFDAPC: a supervised machine learning approach for spatial genetic structure analysis
por: Qin, Xinghu, et al.
Publicado: (2022)

Multi-omics regulatory network inference in the presence of missing data
por: Henao, Juan D, et al.
Publicado: (2023)

Automated and reproducible cell identification in mass cytometry using neural networks
por: Saihi, Hajar, et al.
Publicado: (2023)

Deepening the knowledge of rare diseases dependent on angiogenesis through semantic similarity clustering and network analysis
por: Pagano-Márquez, Raquel, et al.
Publicado: (2022)

From contigs towards chromosomes: automatic improvement of long read assemblies (ILRA)
por: Ruiz, José Luis, et al.
Publicado: (2023)

Ultraliser: a framework for creating multiscale, high-fidelity and geometrically realistic 3D models for in silico neuroscience
por: Abdellah, Marwan, et al.
Publicado: (2022)

Protein functional annotation of simultaneously improved stability, accuracy and false discovery rate achieved by a sequence-based deep learning
por: Hong, Jiajun, et al.
Publicado: (2019)

Clinical trials, progression-speed differentiating features and swiftness rule of the innovative targets of first-in-class drugs
por: Li, Ying Hong, et al.
Publicado: (2019)

ANPELA: analysis and performance assessment of the label-free quantification workflow for metaproteomic studies
por: Tang, Jing, et al.
Publicado: (2019)

CAFU: a Galaxy framework for exploring unmapped RNA-Seq data
por: Chen, Siyuan, et al.
Publicado: (2019)

Virus-CKB: an integrated bioinformatics platform and analysis resource for COVID-19 research
por: Feng, Zhiwei, et al.
Publicado: (2020)

New insights on human essential genes based on integrated analysis and the construction of the HEGIAP web-based platform
por: Chen, Hebing, et al.
Publicado: (2019)

An efficient multi-locus mixed model framework for the detection of small and linked QTLs in F(2)
por: Wen, Yang-Jun, et al.
Publicado: (2018)

Revealing tumor heterogeneity of breast cancer by utilizing the linkage between somatic and germline mutations
por: Zou, Meng, et al.
Publicado: (2018)

Protein–peptide docking using CABS-dock and contact information
por: Blaszczyk, Maciej, et al.
Publicado: (2018)

Regression on imperfect class labels derived by unsupervised clustering
por: Brøndum, Rasmus Froberg, et al.
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_fg405tft0v96kptgd7dv65k2vf