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The occurrence, characteristics, and adaptation of A-to-I RNA editing in bacteria: A review

A-to-I RNA editing is a very important post-transcriptional modification or co-transcriptional modification that creates isoforms and increases the diversity of proteins. In this process, adenosine (A) in RNA molecules is hydrolyzed and deaminated into inosine (I). It is well known that ADAR (adenos...

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Autores principales: Liao, Weixue, Nie, Wenhan, Ahmad, Iftikhar, Chen, Gongyou, Zhu, Bo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10027721/
https://www.ncbi.nlm.nih.gov/pubmed/36960293
http://dx.doi.org/10.3389/fmicb.2023.1143929
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author Liao, Weixue
Nie, Wenhan
Ahmad, Iftikhar
Chen, Gongyou
Zhu, Bo
author_facet Liao, Weixue
Nie, Wenhan
Ahmad, Iftikhar
Chen, Gongyou
Zhu, Bo
author_sort Liao, Weixue
collection PubMed
description A-to-I RNA editing is a very important post-transcriptional modification or co-transcriptional modification that creates isoforms and increases the diversity of proteins. In this process, adenosine (A) in RNA molecules is hydrolyzed and deaminated into inosine (I). It is well known that ADAR (adenosine deaminase acting on RNA)-dependent A-to-I mRNA editing is widespread in animals. Next, the discovery of A-to-I mRNA editing was mediated by TadA (tRNA-specific adenosine deaminase) in Escherichia coli which is ADAR-independent event. Previously, the editing event S128P on the flagellar structural protein FliC enhanced the bacterial tolerance to oxidative stress in Xoc. In addition, the editing events T408A on the enterobactin iron receptor protein XfeA act as switches by controlling the uptake of Fe(3+) in response to the concentration of iron in the environment. Even though bacteria have fewer editing events, the great majority of those that are currently preserved have adaptive benefits. Interestingly, it was found that a TadA-independent A-to-I RNA editing event T408A occurred on xfeA, indicating that there may be other new enzymes that perform a function like TadA. Here, we review recent advances in the characteristics, functions, and adaptations of editing in bacteria.
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spelling pubmed-100277212023-03-22 The occurrence, characteristics, and adaptation of A-to-I RNA editing in bacteria: A review Liao, Weixue Nie, Wenhan Ahmad, Iftikhar Chen, Gongyou Zhu, Bo Front Microbiol Microbiology A-to-I RNA editing is a very important post-transcriptional modification or co-transcriptional modification that creates isoforms and increases the diversity of proteins. In this process, adenosine (A) in RNA molecules is hydrolyzed and deaminated into inosine (I). It is well known that ADAR (adenosine deaminase acting on RNA)-dependent A-to-I mRNA editing is widespread in animals. Next, the discovery of A-to-I mRNA editing was mediated by TadA (tRNA-specific adenosine deaminase) in Escherichia coli which is ADAR-independent event. Previously, the editing event S128P on the flagellar structural protein FliC enhanced the bacterial tolerance to oxidative stress in Xoc. In addition, the editing events T408A on the enterobactin iron receptor protein XfeA act as switches by controlling the uptake of Fe(3+) in response to the concentration of iron in the environment. Even though bacteria have fewer editing events, the great majority of those that are currently preserved have adaptive benefits. Interestingly, it was found that a TadA-independent A-to-I RNA editing event T408A occurred on xfeA, indicating that there may be other new enzymes that perform a function like TadA. Here, we review recent advances in the characteristics, functions, and adaptations of editing in bacteria. Frontiers Media S.A. 2023-03-07 /pmc/articles/PMC10027721/ /pubmed/36960293 http://dx.doi.org/10.3389/fmicb.2023.1143929 Text en Copyright © 2023 Liao, Nie, Ahmad, Chen and Zhu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Liao, Weixue
Nie, Wenhan
Ahmad, Iftikhar
Chen, Gongyou
Zhu, Bo
The occurrence, characteristics, and adaptation of A-to-I RNA editing in bacteria: A review
title The occurrence, characteristics, and adaptation of A-to-I RNA editing in bacteria: A review
title_full The occurrence, characteristics, and adaptation of A-to-I RNA editing in bacteria: A review
title_fullStr The occurrence, characteristics, and adaptation of A-to-I RNA editing in bacteria: A review
title_full_unstemmed The occurrence, characteristics, and adaptation of A-to-I RNA editing in bacteria: A review
title_short The occurrence, characteristics, and adaptation of A-to-I RNA editing in bacteria: A review
title_sort occurrence, characteristics, and adaptation of a-to-i rna editing in bacteria: a review
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10027721/
https://www.ncbi.nlm.nih.gov/pubmed/36960293
http://dx.doi.org/10.3389/fmicb.2023.1143929
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