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The 8q24 region hosts miRNAs altered in biospecimens of colorectal and bladder cancer patients
BACKGROUND: The 8q24 locus is enriched in cancer‐associated polymorphisms and, despite containing relatively few protein‐coding genes, it hosts the MYC oncogene and other genetic elements connected to tumorigenesis, including microRNAs (miRNAs). Research on miRNAs may provide insights into the trans...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10028171/ https://www.ncbi.nlm.nih.gov/pubmed/36366788 http://dx.doi.org/10.1002/cam4.5375 |
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author | Gagliardi, Amedeo Francescato, Giulia Ferrero, Giulio Birolo, Giovanni Tarallo, Sonia Francavilla, Antonio Piaggeschi, Giulia Di Battista, Carla Gallo, Gaetano Realis Luc, Alberto Sacerdote, Carlotta Matullo, Giuseppe Vineis, Paolo Naccarati, Alessio Pardini, Barbara |
author_facet | Gagliardi, Amedeo Francescato, Giulia Ferrero, Giulio Birolo, Giovanni Tarallo, Sonia Francavilla, Antonio Piaggeschi, Giulia Di Battista, Carla Gallo, Gaetano Realis Luc, Alberto Sacerdote, Carlotta Matullo, Giuseppe Vineis, Paolo Naccarati, Alessio Pardini, Barbara |
author_sort | Gagliardi, Amedeo |
collection | PubMed |
description | BACKGROUND: The 8q24 locus is enriched in cancer‐associated polymorphisms and, despite containing relatively few protein‐coding genes, it hosts the MYC oncogene and other genetic elements connected to tumorigenesis, including microRNAs (miRNAs). Research on miRNAs may provide insights into the transcriptomic regulation of this multiple cancer‐associated region. MATERIAL AND METHODS: We profiled all miRNAs located in the 8q24 region in 120 colorectal cancer (CRC) patients and 80 controls. miRNA profiling was performed on cancer/non‐malignant adjacent mucosa, stool, and plasma extracellular vesicles (EVs), and the results validated with The Cancer Genome Atlas (TCGA) data. To verify if the 8q24‐annotated miRNAs altered in CRC were dysregulated in other cancers and biofluids, we evaluated their levels in bladder cancer (BC) cases from the TCGA dataset and in urine and plasma EVs from a set of BC cases and healthy controls. RESULTS: Among the detected mature miRNAs in the region, 12 were altered between CRC and adjacent mucosa (adj. p < 0.05). Five and four miRNAs were confirmed as dysregulated in the CRC and BC TCGA dataset, respectively. A co‐expression analysis of tumor/adjacent tissue data from the CRC group revealed a correlation between the dysregulated miRNAs and CRC‐related genes (PVT1 and MYC) annotated in 8q24 region. miR‐30d‐5p and miR‐151a‐3p, altered in CRC tissue, were also dysregulated in stool of CRC patients and urine of BC cases, respectively. Functional enrichment of dysregulated miRNA target genes highlighted terms related to TP53‐mediated cell cycle control. CONCLUSIONS: Altered expression of 8q24‐annotated miRNAs may be relevant for the initiation and/or progression of cancer. |
format | Online Article Text |
id | pubmed-10028171 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-100281712023-03-22 The 8q24 region hosts miRNAs altered in biospecimens of colorectal and bladder cancer patients Gagliardi, Amedeo Francescato, Giulia Ferrero, Giulio Birolo, Giovanni Tarallo, Sonia Francavilla, Antonio Piaggeschi, Giulia Di Battista, Carla Gallo, Gaetano Realis Luc, Alberto Sacerdote, Carlotta Matullo, Giuseppe Vineis, Paolo Naccarati, Alessio Pardini, Barbara Cancer Med RESEARCH ARTICLES BACKGROUND: The 8q24 locus is enriched in cancer‐associated polymorphisms and, despite containing relatively few protein‐coding genes, it hosts the MYC oncogene and other genetic elements connected to tumorigenesis, including microRNAs (miRNAs). Research on miRNAs may provide insights into the transcriptomic regulation of this multiple cancer‐associated region. MATERIAL AND METHODS: We profiled all miRNAs located in the 8q24 region in 120 colorectal cancer (CRC) patients and 80 controls. miRNA profiling was performed on cancer/non‐malignant adjacent mucosa, stool, and plasma extracellular vesicles (EVs), and the results validated with The Cancer Genome Atlas (TCGA) data. To verify if the 8q24‐annotated miRNAs altered in CRC were dysregulated in other cancers and biofluids, we evaluated their levels in bladder cancer (BC) cases from the TCGA dataset and in urine and plasma EVs from a set of BC cases and healthy controls. RESULTS: Among the detected mature miRNAs in the region, 12 were altered between CRC and adjacent mucosa (adj. p < 0.05). Five and four miRNAs were confirmed as dysregulated in the CRC and BC TCGA dataset, respectively. A co‐expression analysis of tumor/adjacent tissue data from the CRC group revealed a correlation between the dysregulated miRNAs and CRC‐related genes (PVT1 and MYC) annotated in 8q24 region. miR‐30d‐5p and miR‐151a‐3p, altered in CRC tissue, were also dysregulated in stool of CRC patients and urine of BC cases, respectively. Functional enrichment of dysregulated miRNA target genes highlighted terms related to TP53‐mediated cell cycle control. CONCLUSIONS: Altered expression of 8q24‐annotated miRNAs may be relevant for the initiation and/or progression of cancer. John Wiley and Sons Inc. 2022-11-10 /pmc/articles/PMC10028171/ /pubmed/36366788 http://dx.doi.org/10.1002/cam4.5375 Text en © 2022 The Authors. Cancer Medicine published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | RESEARCH ARTICLES Gagliardi, Amedeo Francescato, Giulia Ferrero, Giulio Birolo, Giovanni Tarallo, Sonia Francavilla, Antonio Piaggeschi, Giulia Di Battista, Carla Gallo, Gaetano Realis Luc, Alberto Sacerdote, Carlotta Matullo, Giuseppe Vineis, Paolo Naccarati, Alessio Pardini, Barbara The 8q24 region hosts miRNAs altered in biospecimens of colorectal and bladder cancer patients |
title | The 8q24 region hosts miRNAs altered in biospecimens of colorectal and bladder cancer patients |
title_full | The 8q24 region hosts miRNAs altered in biospecimens of colorectal and bladder cancer patients |
title_fullStr | The 8q24 region hosts miRNAs altered in biospecimens of colorectal and bladder cancer patients |
title_full_unstemmed | The 8q24 region hosts miRNAs altered in biospecimens of colorectal and bladder cancer patients |
title_short | The 8q24 region hosts miRNAs altered in biospecimens of colorectal and bladder cancer patients |
title_sort | 8q24 region hosts mirnas altered in biospecimens of colorectal and bladder cancer patients |
topic | RESEARCH ARTICLES |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10028171/ https://www.ncbi.nlm.nih.gov/pubmed/36366788 http://dx.doi.org/10.1002/cam4.5375 |
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