Cargando…

SCTV-UNet: a COVID-19 CT segmentation network based on attention mechanism

The global outbreak of COVID-19 has become an important research topic in healthcare since 2019. RT-PCR is the main method for detecting COVID-19, but the long detection time is a problem. Therefore, the pathological study of COVID-19 with CT image is an important supplement to RT-RCT. The current T...

Descripción completa

Detalles Bibliográficos
Autores principales: Liu, Xiangbin, Liu, Ying, Fu, Weina, Liu, Shuai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10028784/
https://www.ncbi.nlm.nih.gov/pubmed/37362261
http://dx.doi.org/10.1007/s00500-023-07991-7
_version_ 1784910020958224384
author Liu, Xiangbin
Liu, Ying
Fu, Weina
Liu, Shuai
author_facet Liu, Xiangbin
Liu, Ying
Fu, Weina
Liu, Shuai
author_sort Liu, Xiangbin
collection PubMed
description The global outbreak of COVID-19 has become an important research topic in healthcare since 2019. RT-PCR is the main method for detecting COVID-19, but the long detection time is a problem. Therefore, the pathological study of COVID-19 with CT image is an important supplement to RT-RCT. The current TVLoss-based segmentation promotes the connectivity of diseased areas. However, normal pixels between some adjacent diseased areas are wrongly identified as diseased pixels. In addition, the proportion of diseased pixels in CT images is small, and the traditional BCE-based U-shaped network only focuses on the whole CT without diseased pixels, which leads to blurry border and low contrast in the predicted result. In this way, this paper proposes a SCTV-UNet to solve these problems. By combining spatial and channel attentions on the encoder, more visual layer information are obtained to recognize the normal pixels between adjacent diseased areas. By using the composite function DTVLoss that focuses on the pixels in the diseased area, the problem of blurry boundary and low contrast caused by the use of BCE in traditional U-shaped networks is solved. The experiment shows that the segmentation effect of the proposed SCTV-UNet has significantly improved by comparing with the SOTA COVID-19 segmentation networks, and can play an important role in the detection and research of clinical COVID-19.
format Online
Article
Text
id pubmed-10028784
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Springer Berlin Heidelberg
record_format MEDLINE/PubMed
spelling pubmed-100287842023-03-21 SCTV-UNet: a COVID-19 CT segmentation network based on attention mechanism Liu, Xiangbin Liu, Ying Fu, Weina Liu, Shuai Soft comput Focus The global outbreak of COVID-19 has become an important research topic in healthcare since 2019. RT-PCR is the main method for detecting COVID-19, but the long detection time is a problem. Therefore, the pathological study of COVID-19 with CT image is an important supplement to RT-RCT. The current TVLoss-based segmentation promotes the connectivity of diseased areas. However, normal pixels between some adjacent diseased areas are wrongly identified as diseased pixels. In addition, the proportion of diseased pixels in CT images is small, and the traditional BCE-based U-shaped network only focuses on the whole CT without diseased pixels, which leads to blurry border and low contrast in the predicted result. In this way, this paper proposes a SCTV-UNet to solve these problems. By combining spatial and channel attentions on the encoder, more visual layer information are obtained to recognize the normal pixels between adjacent diseased areas. By using the composite function DTVLoss that focuses on the pixels in the diseased area, the problem of blurry boundary and low contrast caused by the use of BCE in traditional U-shaped networks is solved. The experiment shows that the segmentation effect of the proposed SCTV-UNet has significantly improved by comparing with the SOTA COVID-19 segmentation networks, and can play an important role in the detection and research of clinical COVID-19. Springer Berlin Heidelberg 2023-03-21 /pmc/articles/PMC10028784/ /pubmed/37362261 http://dx.doi.org/10.1007/s00500-023-07991-7 Text en © The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature 2023, Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Focus
Liu, Xiangbin
Liu, Ying
Fu, Weina
Liu, Shuai
SCTV-UNet: a COVID-19 CT segmentation network based on attention mechanism
title SCTV-UNet: a COVID-19 CT segmentation network based on attention mechanism
title_full SCTV-UNet: a COVID-19 CT segmentation network based on attention mechanism
title_fullStr SCTV-UNet: a COVID-19 CT segmentation network based on attention mechanism
title_full_unstemmed SCTV-UNet: a COVID-19 CT segmentation network based on attention mechanism
title_short SCTV-UNet: a COVID-19 CT segmentation network based on attention mechanism
title_sort sctv-unet: a covid-19 ct segmentation network based on attention mechanism
topic Focus
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10028784/
https://www.ncbi.nlm.nih.gov/pubmed/37362261
http://dx.doi.org/10.1007/s00500-023-07991-7
work_keys_str_mv AT liuxiangbin sctvunetacovid19ctsegmentationnetworkbasedonattentionmechanism
AT liuying sctvunetacovid19ctsegmentationnetworkbasedonattentionmechanism
AT fuweina sctvunetacovid19ctsegmentationnetworkbasedonattentionmechanism
AT liushuai sctvunetacovid19ctsegmentationnetworkbasedonattentionmechanism