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An expanded GCaMP reporter toolkit for functional imaging in C. elegans

In living organisms, changes in calcium flux are integral to many different cellular functions and are especially critical for the activity of neurons and myocytes. Genetically encoded calcium indicators (GECIs) have been popular tools for reporting changes in calcium levels in vivo. In particular,...

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Autores principales: Ding, Jimmy, Peng, Lucinda, Moon, Sihoon, Lee, Hyun Jee, Patel, Dhaval S., Lu, Hang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10028802/
https://www.ncbi.nlm.nih.gov/pubmed/36945463
http://dx.doi.org/10.1101/2023.03.06.531342
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author Ding, Jimmy
Peng, Lucinda
Moon, Sihoon
Lee, Hyun Jee
Patel, Dhaval S.
Lu, Hang
author_facet Ding, Jimmy
Peng, Lucinda
Moon, Sihoon
Lee, Hyun Jee
Patel, Dhaval S.
Lu, Hang
author_sort Ding, Jimmy
collection PubMed
description In living organisms, changes in calcium flux are integral to many different cellular functions and are especially critical for the activity of neurons and myocytes. Genetically encoded calcium indicators (GECIs) have been popular tools for reporting changes in calcium levels in vivo. In particular, GCaMP, derived from GFP, are the most widely used GECIs and have become an invaluable toolkit for neurophysiological studies. Recently, new variants of GCaMP, which offer a greater variety of temporal dynamics and improved brightness, have been developed. However, these variants are not readily available to the Caenorhabditis elegans research community. This work reports a set of GCaMP6 and jGCaMP7 reporters optimized for C. elegans studies. Our toolkit provides reporters with improved dynamic range, varied kinetics, and targeted subcellular localizations. Besides optimized routine uses, this set of reporters are also well-suited for studies requiring fast imaging speeds and low magnification or low-cost platforms.
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spelling pubmed-100288022023-03-22 An expanded GCaMP reporter toolkit for functional imaging in C. elegans Ding, Jimmy Peng, Lucinda Moon, Sihoon Lee, Hyun Jee Patel, Dhaval S. Lu, Hang bioRxiv Article In living organisms, changes in calcium flux are integral to many different cellular functions and are especially critical for the activity of neurons and myocytes. Genetically encoded calcium indicators (GECIs) have been popular tools for reporting changes in calcium levels in vivo. In particular, GCaMP, derived from GFP, are the most widely used GECIs and have become an invaluable toolkit for neurophysiological studies. Recently, new variants of GCaMP, which offer a greater variety of temporal dynamics and improved brightness, have been developed. However, these variants are not readily available to the Caenorhabditis elegans research community. This work reports a set of GCaMP6 and jGCaMP7 reporters optimized for C. elegans studies. Our toolkit provides reporters with improved dynamic range, varied kinetics, and targeted subcellular localizations. Besides optimized routine uses, this set of reporters are also well-suited for studies requiring fast imaging speeds and low magnification or low-cost platforms. Cold Spring Harbor Laboratory 2023-03-08 /pmc/articles/PMC10028802/ /pubmed/36945463 http://dx.doi.org/10.1101/2023.03.06.531342 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which allows reusers to copy and distribute the material in any medium or format in unadapted form only, for noncommercial purposes only, and only so long as attribution is given to the creator.
spellingShingle Article
Ding, Jimmy
Peng, Lucinda
Moon, Sihoon
Lee, Hyun Jee
Patel, Dhaval S.
Lu, Hang
An expanded GCaMP reporter toolkit for functional imaging in C. elegans
title An expanded GCaMP reporter toolkit for functional imaging in C. elegans
title_full An expanded GCaMP reporter toolkit for functional imaging in C. elegans
title_fullStr An expanded GCaMP reporter toolkit for functional imaging in C. elegans
title_full_unstemmed An expanded GCaMP reporter toolkit for functional imaging in C. elegans
title_short An expanded GCaMP reporter toolkit for functional imaging in C. elegans
title_sort expanded gcamp reporter toolkit for functional imaging in c. elegans
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10028802/
https://www.ncbi.nlm.nih.gov/pubmed/36945463
http://dx.doi.org/10.1101/2023.03.06.531342
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