Cargando…

Tracking live-cell single-molecule dynamics enables measurements of heterochromatinassociated protein-protein interactions

Visualizing and measuring molecular-scale interactions in living cells represents a major challenge, but recent advances in microscopy are bringing us closer to achieving this goal. Single-molecule super-resolution microscopy enables high-resolution and sensitive imaging of the positions and movemen...

Descripción completa

Detalles Bibliográficos
Autores principales:	Chen, Ziyuan, Seman, Melissa, Farhat, Ali, Fyodorova, Yekaterina, Biswas, Saikat, Levashkevich, Alexander, Freddolino, P. Lydia, Biteen, Julie S., Ragunathan, Kaushik
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Cold Spring Harbor Laboratory 2023
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10028927/ https://www.ncbi.nlm.nih.gov/pubmed/36945633 http://dx.doi.org/10.1101/2023.03.08.531771

Ejemplares similares

HP1 oligomerization compensates for low-affinity H3K9me recognition and provides a tunable mechanism for heterochromatin-specific localization
por: Biswas, Saikat, et al.
Publicado: (2022)

Uncoupling the distinct functions of HP1 proteins during heterochromatin establishment and maintenance
por: Seman, Melissa, et al.
Publicado: (2023)

NOBIAS: Analyzing Anomalous Diffusion in Single-Molecule Tracks With Nonparametric Bayesian Inference
por: Chen, Ziyuan, et al.
Publicado: (2021)

An H3K9 methylation-dependent protein interaction regulates the non-enzymatic functions of a putative histone demethylase
por: Raiymbek, Gulzhan, et al.
Publicado: (2020)

Probing Cellular Protein Complexes via Single Molecule Pull-down
por: Jain, Ankur, et al.
Publicado: (2011)

Imaging Live Cells at the Nanometer-Scale with Single-Molecule Microscopy: Obstacles and Achievements in Experiment Optimization for Microbiology
por: Haas, Beth L., et al.
Publicado: (2014)

DNA Methylation and RNA-DNA Hybrids Regulate the Single-Molecule Localization of a DNA Methyltransferase on the Bacterial Nucleoid
por: Fernandez, Nicolas L., et al.
Publicado: (2023)

Imaging living obligate anaerobic bacteria with bilin-binding fluorescent proteins
por: Chia, Hannah E., et al.
Publicado: (2020)

COFACTOR: improved protein function prediction by combining structure, sequence and protein–protein interaction information
por: Zhang, Chengxin, et al.
Publicado: (2017)

Understanding Protein Mobility in Bacteria by Tracking Single Molecules
por: Kapanidis, Achillefs N., et al.
Publicado: (2018)

FRET-enhanced photostability allows improved single-molecule tracking of proteins and protein complexes in live mammalian cells
por: Basu, Srinjan, et al.
Publicado: (2018)

Quantum dot assisted tracking of the intracellular protein Cyclin E in Xenopus laevis embryos
por: Brandt, Yekaterina I, et al.
Publicado: (2015)

Aptamers with Tunable Affinity Enable Single‐Molecule Tracking and Localization of Membrane Receptors on Living Cancer Cells
por: Delcanale, Pietro, et al.
Publicado: (2020)

Enabling Large-Scale Design, Synthesis and Validation of Small Molecule Protein-Protein Antagonists
por: Koes, David, et al.
Publicado: (2012)

TagBiFC technique allows long-term single-molecule tracking of protein-protein interactions in living cells
por: Shao, Shipeng, et al.
Publicado: (2021)

Visualizing Protein-DNA Interactions in Live Bacterial Cells Using Photoactivated Single-molecule Tracking
por: Uphoff, Stephan, et al.
Publicado: (2014)

Single-molecule tracking for studying protein dynamics and target-search mechanism in live cells of S. cerevisiae
por: Podh, Nitesh Kumar, et al.
Publicado: (2022)

Enhancements to the Rosetta Energy Function Enable Improved Identification of Small Molecules that Inhibit Protein-Protein Interactions
por: Bazzoli, Andrea, et al.
Publicado: (2015)

Probability-based particle detection that enables threshold-free and robust in vivo single-molecule tracking
por: Smith, Carlas S., et al.
Publicado: (2015)

Chemical reactivation of quenched fluorescent protein molecules enables resin-embedded fluorescence microimaging
por: Xiong, Hanqing, et al.
Publicado: (2014)

PEPPI: Whole-proteome Protein-protein Interaction Prediction through Structure and Sequence Similarity, Functional Association, and Machine Learning
por: Bell, Eric W., et al.
Publicado: (2022)

Mass photometry enables label-free tracking and mass measurement of single proteins on lipid bilayers
por: Foley, Eric D. B., et al.
Publicado: (2021)

Stochastic tuning of gene expression enables cellular adaptation in the absence of pre-existing regulatory circuitry
por: Freddolino, Peter L, et al.
Publicado: (2018)

M-Track: detecting short-lived protein-protein interactions in vivo
por: Zuzuarregui, Aurora, et al.
Publicado: (2012)

Escherichia coli Leucine-Responsive Regulatory Protein Bridges DNA In Vivo and Tunably Dissociates in the Presence of Exogenous Leucine
por: Ziegler, Christine A., et al.
Publicado: (2023)

Microsecond dynamics of an unfolded protein by a line confocal tracking of single molecule fluorescence
por: Oikawa, Hiroyuki, et al.
Publicado: (2013)

Cryptic-Prophage-Encoded Small Protein DicB Protects Escherichia coli from Phage Infection by Inhibiting Inner Membrane Receptor Proteins
por: Ragunathan, Preethi T., et al.
Publicado: (2019)

Targeting at the Nanoscale: A Novel S-Layer Fusion Protein Enabling Controlled Immobilization of Biotinylated Molecules
por: Varga, Melinda
Publicado: (2016)

Protein-guided RNA dynamics during early ribosome assembly
por: Kim, Hajin, et al.
Publicado: (2014)

Dual-color DNA-PAINT single-particle tracking enables extended studies of membrane protein interactions
por: Niederauer, Christian, et al.
Publicado: (2023)

Dynamic landscape of protein occupancy across the Escherichia coli chromosome
por: Freddolino, Peter L., et al.
Publicado: (2021)

Protein synthesis molecule by molecule
por: Golding, Ido, et al.
Publicado: (2006)

DySCo: Quantitating Associations of Membrane Proteins Using Two-Color Single-Molecule Tracking
por: Dunne, Paul D., et al.
Publicado: (2009)

Correction: Dynamic landscape of protein occupancy across the Escherichia coli chromosome
por: Freddolino, Peter L., et al.
Publicado: (2022)

Light Sheet Microscopy for Single Molecule Tracking in Living Tissue
por: Ritter, Jörg Gerhard, et al.
Publicado: (2010)

Choosing the right label for single-molecule tracking in live bacteria: side-by-side comparison of photoactivatable fluorescent protein and Halo tag dyes
por: Banaz, Nehir, et al.
Publicado: (2019)

Single-molecule tracking in live cells reveals distinct target-search strategies of transcription factors in the nucleus
por: Izeddin, Ignacio, et al.
Publicado: (2014)

Evolution of protein-coupled RNA dynamics during hierarchical assembly of ribosomal complexes
por: Abeysirigunawardena, Sanjaya C., et al.
Publicado: (2017)

Mixed Macromolecular Crowding: A Protein and Solvent Perspective
por: Biswas, Saikat, et al.
Publicado: (2018)

Diffracted X-ray Tracking for Observing the Internal Motions of Individual Protein Molecules and Its Extended Methodologies
por: Sasaki, Yuji C.
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_jcpe1p3bb86limpqlie4f0k1pm