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Real-Time Whole Genome Sequencing to Guide Patient-Tailored Therapy of Severe Acute Respiratory Syndrome Coronavirus 2 Infection

The management of coronavirus disease 2019 has become more complex due to the expansion of available therapies. The presence of severe acute respiratory syndrome coronavirus 2 variants and mutations further complicates treatment due to their differing susceptibilities to therapies. Here we outline t...

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Autores principales: Snell, Luke B, Alcolea-Medina, Adela, Charalampous, Themoula, Alder, Christopher, Williams, Tom G S, Flaviani, Flavia, Batra, Rahul, Bakrania, Prijay, Thangarajah, Rajeni, Neil, Stuart J D, van Nispen tot Pannerden, Claire, Botgros, Alina, Aarons, Emma, Douthwaite, Samuel T, Edgeworth, Jonathan D, Nebbia, Gaia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10029986/
https://www.ncbi.nlm.nih.gov/pubmed/36327795
http://dx.doi.org/10.1093/cid/ciac864
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author Snell, Luke B
Alcolea-Medina, Adela
Charalampous, Themoula
Alder, Christopher
Williams, Tom G S
Flaviani, Flavia
Batra, Rahul
Bakrania, Prijay
Thangarajah, Rajeni
Neil, Stuart J D
van Nispen tot Pannerden, Claire
Botgros, Alina
Aarons, Emma
Douthwaite, Samuel T
Edgeworth, Jonathan D
Nebbia, Gaia
author_facet Snell, Luke B
Alcolea-Medina, Adela
Charalampous, Themoula
Alder, Christopher
Williams, Tom G S
Flaviani, Flavia
Batra, Rahul
Bakrania, Prijay
Thangarajah, Rajeni
Neil, Stuart J D
van Nispen tot Pannerden, Claire
Botgros, Alina
Aarons, Emma
Douthwaite, Samuel T
Edgeworth, Jonathan D
Nebbia, Gaia
author_sort Snell, Luke B
collection PubMed
description The management of coronavirus disease 2019 has become more complex due to the expansion of available therapies. The presence of severe acute respiratory syndrome coronavirus 2 variants and mutations further complicates treatment due to their differing susceptibilities to therapies. Here we outline the use of real-time whole genome sequencing to detect persistent infection, evaluate for mutations confering resistance to treatments, and guide treatment decisions.
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spelling pubmed-100299862023-03-22 Real-Time Whole Genome Sequencing to Guide Patient-Tailored Therapy of Severe Acute Respiratory Syndrome Coronavirus 2 Infection Snell, Luke B Alcolea-Medina, Adela Charalampous, Themoula Alder, Christopher Williams, Tom G S Flaviani, Flavia Batra, Rahul Bakrania, Prijay Thangarajah, Rajeni Neil, Stuart J D van Nispen tot Pannerden, Claire Botgros, Alina Aarons, Emma Douthwaite, Samuel T Edgeworth, Jonathan D Nebbia, Gaia Clin Infect Dis Brief Report The management of coronavirus disease 2019 has become more complex due to the expansion of available therapies. The presence of severe acute respiratory syndrome coronavirus 2 variants and mutations further complicates treatment due to their differing susceptibilities to therapies. Here we outline the use of real-time whole genome sequencing to detect persistent infection, evaluate for mutations confering resistance to treatments, and guide treatment decisions. Oxford University Press 2022-11-03 /pmc/articles/PMC10029986/ /pubmed/36327795 http://dx.doi.org/10.1093/cid/ciac864 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of Infectious Diseases Society of America. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Brief Report
Snell, Luke B
Alcolea-Medina, Adela
Charalampous, Themoula
Alder, Christopher
Williams, Tom G S
Flaviani, Flavia
Batra, Rahul
Bakrania, Prijay
Thangarajah, Rajeni
Neil, Stuart J D
van Nispen tot Pannerden, Claire
Botgros, Alina
Aarons, Emma
Douthwaite, Samuel T
Edgeworth, Jonathan D
Nebbia, Gaia
Real-Time Whole Genome Sequencing to Guide Patient-Tailored Therapy of Severe Acute Respiratory Syndrome Coronavirus 2 Infection
title Real-Time Whole Genome Sequencing to Guide Patient-Tailored Therapy of Severe Acute Respiratory Syndrome Coronavirus 2 Infection
title_full Real-Time Whole Genome Sequencing to Guide Patient-Tailored Therapy of Severe Acute Respiratory Syndrome Coronavirus 2 Infection
title_fullStr Real-Time Whole Genome Sequencing to Guide Patient-Tailored Therapy of Severe Acute Respiratory Syndrome Coronavirus 2 Infection
title_full_unstemmed Real-Time Whole Genome Sequencing to Guide Patient-Tailored Therapy of Severe Acute Respiratory Syndrome Coronavirus 2 Infection
title_short Real-Time Whole Genome Sequencing to Guide Patient-Tailored Therapy of Severe Acute Respiratory Syndrome Coronavirus 2 Infection
title_sort real-time whole genome sequencing to guide patient-tailored therapy of severe acute respiratory syndrome coronavirus 2 infection
topic Brief Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10029986/
https://www.ncbi.nlm.nih.gov/pubmed/36327795
http://dx.doi.org/10.1093/cid/ciac864
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