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Integrated bioinformatics analysis identifies shared immune changes between ischemic stroke and COVID 19
Although COVID-19 is primarily a respiratory disease, its neurological complications, such as ischemic stroke (IS), have aroused growing concerns and reports. However, the molecular mechanisms that underlie IS and COVID-19 are not well understood. Therefore, we implemented transcriptomic analysis fr...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10030956/ https://www.ncbi.nlm.nih.gov/pubmed/36969251 http://dx.doi.org/10.3389/fimmu.2023.1102281 |
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author | Liu, Wenhao Han, Fei Wan, Mengyao Yang, Xin-Zhuang |
author_facet | Liu, Wenhao Han, Fei Wan, Mengyao Yang, Xin-Zhuang |
author_sort | Liu, Wenhao |
collection | PubMed |
description | Although COVID-19 is primarily a respiratory disease, its neurological complications, such as ischemic stroke (IS), have aroused growing concerns and reports. However, the molecular mechanisms that underlie IS and COVID-19 are not well understood. Therefore, we implemented transcriptomic analysis from eight GEO datasets consist of 1191 samples to detect common pathways and molecular biomarkers in IS and COVID-19 that help understand the linkage between them. Differentially expressed genes (DEGs) were detected for IS and COVID-19 separately for finding shared mechanisms and we found that immune-related pathways were outlined with statistical significance. JAK2, which was identified as a hub gene, was supposed to be a potential therapeutic gene targets during the immunological process of COVID-19 and IS. Besides, we found a decrease in the proportion of CD8(+) T and T helper 2 cells in the peripheral circulation of both COVID and IS patients, and NCR3 expression was significantly correlated with this change. In conclusion, we demonstrated that transcriptomic analyses reported in this study could make a deeper understanding of the common mechanism and might be promising for effective therapeutic for IS and COVID-19. |
format | Online Article Text |
id | pubmed-10030956 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-100309562023-03-23 Integrated bioinformatics analysis identifies shared immune changes between ischemic stroke and COVID 19 Liu, Wenhao Han, Fei Wan, Mengyao Yang, Xin-Zhuang Front Immunol Immunology Although COVID-19 is primarily a respiratory disease, its neurological complications, such as ischemic stroke (IS), have aroused growing concerns and reports. However, the molecular mechanisms that underlie IS and COVID-19 are not well understood. Therefore, we implemented transcriptomic analysis from eight GEO datasets consist of 1191 samples to detect common pathways and molecular biomarkers in IS and COVID-19 that help understand the linkage between them. Differentially expressed genes (DEGs) were detected for IS and COVID-19 separately for finding shared mechanisms and we found that immune-related pathways were outlined with statistical significance. JAK2, which was identified as a hub gene, was supposed to be a potential therapeutic gene targets during the immunological process of COVID-19 and IS. Besides, we found a decrease in the proportion of CD8(+) T and T helper 2 cells in the peripheral circulation of both COVID and IS patients, and NCR3 expression was significantly correlated with this change. In conclusion, we demonstrated that transcriptomic analyses reported in this study could make a deeper understanding of the common mechanism and might be promising for effective therapeutic for IS and COVID-19. Frontiers Media S.A. 2023-03-08 /pmc/articles/PMC10030956/ /pubmed/36969251 http://dx.doi.org/10.3389/fimmu.2023.1102281 Text en Copyright © 2023 Liu, Han, Wan and Yang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Immunology Liu, Wenhao Han, Fei Wan, Mengyao Yang, Xin-Zhuang Integrated bioinformatics analysis identifies shared immune changes between ischemic stroke and COVID 19 |
title | Integrated bioinformatics analysis identifies shared immune changes between ischemic stroke and COVID 19 |
title_full | Integrated bioinformatics analysis identifies shared immune changes between ischemic stroke and COVID 19 |
title_fullStr | Integrated bioinformatics analysis identifies shared immune changes between ischemic stroke and COVID 19 |
title_full_unstemmed | Integrated bioinformatics analysis identifies shared immune changes between ischemic stroke and COVID 19 |
title_short | Integrated bioinformatics analysis identifies shared immune changes between ischemic stroke and COVID 19 |
title_sort | integrated bioinformatics analysis identifies shared immune changes between ischemic stroke and covid 19 |
topic | Immunology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10030956/ https://www.ncbi.nlm.nih.gov/pubmed/36969251 http://dx.doi.org/10.3389/fimmu.2023.1102281 |
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