Cargando…
Visual dynamics: a WEB application for molecular dynamics simulation using GROMACS
BACKGROUND: The molecular dynamics is an approach to obtain kinetic and thermodynamic characteristics of biomolecular structures. The molecular dynamics simulation softwares are very useful, however, most of them are used in command line form and continue with the same common implementation difficul...
Autores principales: | Vieira, Ivo Henrique Provensi, Botelho, Eduardo Buganemi, de Souza Gomes, Thales Junior, Kist, Roger, Caceres, Rafael Andrade, Zanchi, Fernando Berton |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10031864/ https://www.ncbi.nlm.nih.gov/pubmed/36949402 http://dx.doi.org/10.1186/s12859-023-05234-y |
Ejemplares similares
-
CHAPERONg: A tool for automated GROMACS-based molecular dynamics simulations and trajectory analyses
por: Yekeen, Abeeb Abiodun, et al.
Publicado: (2023) -
MkVsites: A tool for creating GROMACS virtual sites parameters to increase performance in all‐atom molecular dynamics simulations
por: Larsson, Per, et al.
Publicado: (2020) -
Best bang for your buck: GPU nodes for GROMACS biomolecular simulations
por: Kutzner, Carsten, et al.
Publicado: (2015) -
Scalable Constant pH Molecular Dynamics in GROMACS
por: Aho, Noora, et al.
Publicado: (2022) -
JBrowse: a dynamic web platform for genome visualization and analysis
por: Buels, Robert, et al.
Publicado: (2016)