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Using deep learning for pruning region detection and plant organ segmentation in dormant spur-pruned grapevines

Even though mechanization has dramatically decreased labor requirements, vineyard management costs are still affected by selective operations such as winter pruning. Robotic solutions are becoming more common in agriculture, however, few studies have focused on grapevines. This work aims at fine-tun...

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Autores principales: Guadagna, P., Fernandes, M., Chen, F., Santamaria, A., Teng, T., Frioni, T., Caldwell, D. G., Poni, S., Semini, C., Gatti, M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10032262/
https://www.ncbi.nlm.nih.gov/pubmed/37363791
http://dx.doi.org/10.1007/s11119-023-10006-y
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author Guadagna, P.
Fernandes, M.
Chen, F.
Santamaria, A.
Teng, T.
Frioni, T.
Caldwell, D. G.
Poni, S.
Semini, C.
Gatti, M.
author_facet Guadagna, P.
Fernandes, M.
Chen, F.
Santamaria, A.
Teng, T.
Frioni, T.
Caldwell, D. G.
Poni, S.
Semini, C.
Gatti, M.
author_sort Guadagna, P.
collection PubMed
description Even though mechanization has dramatically decreased labor requirements, vineyard management costs are still affected by selective operations such as winter pruning. Robotic solutions are becoming more common in agriculture, however, few studies have focused on grapevines. This work aims at fine-tuning and testing two different deep neural networks for: (i) detecting pruning regions (PRs), and (ii) performing organ segmentation of spur-pruned dormant grapevines. The Faster R-CNN network was fine-tuned using 1215 RGB images collected in different vineyards and annotated through bounding boxes. The network was tested on 232 RGB images, PRs were categorized by wood type (W), orientation (Or) and visibility (V), and performance metrics were calculated. PR detection was dramatically affected by visibility. Highest detection was associated with visible intermediate complex spurs in Merlot (0.97), while most represented coplanar simple spurs allowed a 74% detection rate. The Mask R-CNN network was trained for grapevine organs (GOs) segmentation by using 119 RGB images annotated by distinguishing 5 classes (cordon, arm, spur, cane and node). The network was tested on 60 RGB images of light pruned (LP), shoot-thinned (ST) and unthinned control (C) grapevines. Nodes were the best segmented GOs (0.88) and general recall was higher for ST (0.85) compared to C (0.80) confirming the role of canopy management in improving performances of hi-tech solutions based on artificial intelligence. The two fine-tuned and tested networks are part of a larger control framework that is under development for autonomous winter pruning of grapevines. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s11119-023-10006-y.
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spelling pubmed-100322622023-03-23 Using deep learning for pruning region detection and plant organ segmentation in dormant spur-pruned grapevines Guadagna, P. Fernandes, M. Chen, F. Santamaria, A. Teng, T. Frioni, T. Caldwell, D. G. Poni, S. Semini, C. Gatti, M. Precis Agric Article Even though mechanization has dramatically decreased labor requirements, vineyard management costs are still affected by selective operations such as winter pruning. Robotic solutions are becoming more common in agriculture, however, few studies have focused on grapevines. This work aims at fine-tuning and testing two different deep neural networks for: (i) detecting pruning regions (PRs), and (ii) performing organ segmentation of spur-pruned dormant grapevines. The Faster R-CNN network was fine-tuned using 1215 RGB images collected in different vineyards and annotated through bounding boxes. The network was tested on 232 RGB images, PRs were categorized by wood type (W), orientation (Or) and visibility (V), and performance metrics were calculated. PR detection was dramatically affected by visibility. Highest detection was associated with visible intermediate complex spurs in Merlot (0.97), while most represented coplanar simple spurs allowed a 74% detection rate. The Mask R-CNN network was trained for grapevine organs (GOs) segmentation by using 119 RGB images annotated by distinguishing 5 classes (cordon, arm, spur, cane and node). The network was tested on 60 RGB images of light pruned (LP), shoot-thinned (ST) and unthinned control (C) grapevines. Nodes were the best segmented GOs (0.88) and general recall was higher for ST (0.85) compared to C (0.80) confirming the role of canopy management in improving performances of hi-tech solutions based on artificial intelligence. The two fine-tuned and tested networks are part of a larger control framework that is under development for autonomous winter pruning of grapevines. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s11119-023-10006-y. Springer US 2023-03-22 /pmc/articles/PMC10032262/ /pubmed/37363791 http://dx.doi.org/10.1007/s11119-023-10006-y Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Guadagna, P.
Fernandes, M.
Chen, F.
Santamaria, A.
Teng, T.
Frioni, T.
Caldwell, D. G.
Poni, S.
Semini, C.
Gatti, M.
Using deep learning for pruning region detection and plant organ segmentation in dormant spur-pruned grapevines
title Using deep learning for pruning region detection and plant organ segmentation in dormant spur-pruned grapevines
title_full Using deep learning for pruning region detection and plant organ segmentation in dormant spur-pruned grapevines
title_fullStr Using deep learning for pruning region detection and plant organ segmentation in dormant spur-pruned grapevines
title_full_unstemmed Using deep learning for pruning region detection and plant organ segmentation in dormant spur-pruned grapevines
title_short Using deep learning for pruning region detection and plant organ segmentation in dormant spur-pruned grapevines
title_sort using deep learning for pruning region detection and plant organ segmentation in dormant spur-pruned grapevines
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10032262/
https://www.ncbi.nlm.nih.gov/pubmed/37363791
http://dx.doi.org/10.1007/s11119-023-10006-y
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