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A noninvasive nomogram model based on CT features to predict DNA mismatch repair deficiency in gastric cancer

OBJECTIVES: DNA mismatch repair deficiency (dMMR) status has served as a positive predictive biomarker for immunotherapy and long-term prognosis in gastric cancer (GC). The aim of the present study was to develop a computed tomography (CT)-based nomogram for preoperatively predicting mismatch repair...

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Autores principales: Chen, Jie-Yu, Tong, Ya-Han, Chen, Hai-Yan, Yang, Yong-Bo, Deng, Xue-Ying, Shao, Guo-Liang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10034198/
https://www.ncbi.nlm.nih.gov/pubmed/36969034
http://dx.doi.org/10.3389/fonc.2023.1066352
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author Chen, Jie-Yu
Tong, Ya-Han
Chen, Hai-Yan
Yang, Yong-Bo
Deng, Xue-Ying
Shao, Guo-Liang
author_facet Chen, Jie-Yu
Tong, Ya-Han
Chen, Hai-Yan
Yang, Yong-Bo
Deng, Xue-Ying
Shao, Guo-Liang
author_sort Chen, Jie-Yu
collection PubMed
description OBJECTIVES: DNA mismatch repair deficiency (dMMR) status has served as a positive predictive biomarker for immunotherapy and long-term prognosis in gastric cancer (GC). The aim of the present study was to develop a computed tomography (CT)-based nomogram for preoperatively predicting mismatch repair (MMR) status in GC. METHODS: Data from a total of 159 GC patients between January 2020 and July 2021 with dMMR GC (n=53) and MMR-proficient (pMMR) GC (n=106) confirmed by postoperative immunohistochemistry (IHC) staining were retrospectively analyzed. All patients underwent abdominal contrast-enhanced CT. Significant clinical and CT imaging features associated with dMMR GC were extracted through univariate and multivariate analyses. Receiver operating characteristic (ROC) curve analysis, decision curve analysis (DCA) and internal validation of the cohort data were performed. RESULTS: The nomogram contained four potential predictors of dMMR GC, including gender (odds ratio [OR] 9.83, 95% confidence interval [CI] 3.78-28.20, P < 0.001), age (OR 3.32, 95% CI 1.36-8.50, P = 0.010), tumor size (OR 5.66, 95% CI 2.12-16.27, P < 0.001) and normalized tumor enhancement ratio (NTER) (OR 0.15, 95% CI 0.06-0.38, P < 0.001). Using an optimal cutoff value of 6.6 points, the nomogram provided an area under the curve (AUC) of 0.895 and an accuracy of 82.39% in predicting dMMR GC. The calibration curve demonstrated a strong consistency between the predicted risk and observed dMMR GC. The DCA justified the relatively good performance of the nomogram model. CONCLUSION: The CT-based nomogram holds promise as a noninvasive, concise and accurate tool to predict MMR status in GC patients, which can assist in clinical decision-making.
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spelling pubmed-100341982023-03-24 A noninvasive nomogram model based on CT features to predict DNA mismatch repair deficiency in gastric cancer Chen, Jie-Yu Tong, Ya-Han Chen, Hai-Yan Yang, Yong-Bo Deng, Xue-Ying Shao, Guo-Liang Front Oncol Oncology OBJECTIVES: DNA mismatch repair deficiency (dMMR) status has served as a positive predictive biomarker for immunotherapy and long-term prognosis in gastric cancer (GC). The aim of the present study was to develop a computed tomography (CT)-based nomogram for preoperatively predicting mismatch repair (MMR) status in GC. METHODS: Data from a total of 159 GC patients between January 2020 and July 2021 with dMMR GC (n=53) and MMR-proficient (pMMR) GC (n=106) confirmed by postoperative immunohistochemistry (IHC) staining were retrospectively analyzed. All patients underwent abdominal contrast-enhanced CT. Significant clinical and CT imaging features associated with dMMR GC were extracted through univariate and multivariate analyses. Receiver operating characteristic (ROC) curve analysis, decision curve analysis (DCA) and internal validation of the cohort data were performed. RESULTS: The nomogram contained four potential predictors of dMMR GC, including gender (odds ratio [OR] 9.83, 95% confidence interval [CI] 3.78-28.20, P < 0.001), age (OR 3.32, 95% CI 1.36-8.50, P = 0.010), tumor size (OR 5.66, 95% CI 2.12-16.27, P < 0.001) and normalized tumor enhancement ratio (NTER) (OR 0.15, 95% CI 0.06-0.38, P < 0.001). Using an optimal cutoff value of 6.6 points, the nomogram provided an area under the curve (AUC) of 0.895 and an accuracy of 82.39% in predicting dMMR GC. The calibration curve demonstrated a strong consistency between the predicted risk and observed dMMR GC. The DCA justified the relatively good performance of the nomogram model. CONCLUSION: The CT-based nomogram holds promise as a noninvasive, concise and accurate tool to predict MMR status in GC patients, which can assist in clinical decision-making. Frontiers Media S.A. 2023-03-09 /pmc/articles/PMC10034198/ /pubmed/36969034 http://dx.doi.org/10.3389/fonc.2023.1066352 Text en Copyright © 2023 Chen, Tong, Chen, Yang, Deng and Shao https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Chen, Jie-Yu
Tong, Ya-Han
Chen, Hai-Yan
Yang, Yong-Bo
Deng, Xue-Ying
Shao, Guo-Liang
A noninvasive nomogram model based on CT features to predict DNA mismatch repair deficiency in gastric cancer
title A noninvasive nomogram model based on CT features to predict DNA mismatch repair deficiency in gastric cancer
title_full A noninvasive nomogram model based on CT features to predict DNA mismatch repair deficiency in gastric cancer
title_fullStr A noninvasive nomogram model based on CT features to predict DNA mismatch repair deficiency in gastric cancer
title_full_unstemmed A noninvasive nomogram model based on CT features to predict DNA mismatch repair deficiency in gastric cancer
title_short A noninvasive nomogram model based on CT features to predict DNA mismatch repair deficiency in gastric cancer
title_sort noninvasive nomogram model based on ct features to predict dna mismatch repair deficiency in gastric cancer
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10034198/
https://www.ncbi.nlm.nih.gov/pubmed/36969034
http://dx.doi.org/10.3389/fonc.2023.1066352
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