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Conformational dynamics control assembly of an extremely long bacteriophage tail tube

Tail tube assembly is an essential step in the lifecycle of long-tailed bacteriophages. Limited structural and biophysical information has impeded an understanding of assembly and stability of their long, flexible tail tubes. The hyperthermophilic phage P74-26 is particularly intriguing as it has th...

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Autores principales: Agnello, Emily, Pajak, Joshua, Liu, Xingchen, Kelch, Brian A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Biochemistry and Molecular Biology 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10034513/
https://www.ncbi.nlm.nih.gov/pubmed/36791911
http://dx.doi.org/10.1016/j.jbc.2023.103021
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author Agnello, Emily
Pajak, Joshua
Liu, Xingchen
Kelch, Brian A.
author_facet Agnello, Emily
Pajak, Joshua
Liu, Xingchen
Kelch, Brian A.
author_sort Agnello, Emily
collection PubMed
description Tail tube assembly is an essential step in the lifecycle of long-tailed bacteriophages. Limited structural and biophysical information has impeded an understanding of assembly and stability of their long, flexible tail tubes. The hyperthermophilic phage P74-26 is particularly intriguing as it has the longest tail of any known virus (nearly 1 μm) and is the most thermostable known phage. Here, we use structures of the P74-26 tail tube along with an in vitro system for studying tube assembly kinetics to propose the first molecular model for the tail tube assembly of long-tailed phages. Our high-resolution cryo-EM structure provides insight into how the P74-26 phage assembles through flexible loops that fit into neighboring rings through tight “ball-and-socket”-like interactions. Guided by this structure, and in combination with mutational, light scattering, and molecular dynamics simulations data, we propose a model for the assembly of conserved tube-like structures across phage and other entities possessing tail tube–like proteins. We propose that formation of a full ring promotes the adoption of a tube elongation-competent conformation among the flexible loops and their corresponding sockets, which is further stabilized by an adjacent ring. Tail assembly is controlled by the cooperative interaction of dynamic intraring and interring contacts. Given the structural conservation among tail tube proteins and tail-like structures, our model can explain the mechanism of high-fidelity assembly of long, stable tubes.
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spelling pubmed-100345132023-03-24 Conformational dynamics control assembly of an extremely long bacteriophage tail tube Agnello, Emily Pajak, Joshua Liu, Xingchen Kelch, Brian A. J Biol Chem Research Article Tail tube assembly is an essential step in the lifecycle of long-tailed bacteriophages. Limited structural and biophysical information has impeded an understanding of assembly and stability of their long, flexible tail tubes. The hyperthermophilic phage P74-26 is particularly intriguing as it has the longest tail of any known virus (nearly 1 μm) and is the most thermostable known phage. Here, we use structures of the P74-26 tail tube along with an in vitro system for studying tube assembly kinetics to propose the first molecular model for the tail tube assembly of long-tailed phages. Our high-resolution cryo-EM structure provides insight into how the P74-26 phage assembles through flexible loops that fit into neighboring rings through tight “ball-and-socket”-like interactions. Guided by this structure, and in combination with mutational, light scattering, and molecular dynamics simulations data, we propose a model for the assembly of conserved tube-like structures across phage and other entities possessing tail tube–like proteins. We propose that formation of a full ring promotes the adoption of a tube elongation-competent conformation among the flexible loops and their corresponding sockets, which is further stabilized by an adjacent ring. Tail assembly is controlled by the cooperative interaction of dynamic intraring and interring contacts. Given the structural conservation among tail tube proteins and tail-like structures, our model can explain the mechanism of high-fidelity assembly of long, stable tubes. American Society for Biochemistry and Molecular Biology 2023-02-13 /pmc/articles/PMC10034513/ /pubmed/36791911 http://dx.doi.org/10.1016/j.jbc.2023.103021 Text en © 2023 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Research Article
Agnello, Emily
Pajak, Joshua
Liu, Xingchen
Kelch, Brian A.
Conformational dynamics control assembly of an extremely long bacteriophage tail tube
title Conformational dynamics control assembly of an extremely long bacteriophage tail tube
title_full Conformational dynamics control assembly of an extremely long bacteriophage tail tube
title_fullStr Conformational dynamics control assembly of an extremely long bacteriophage tail tube
title_full_unstemmed Conformational dynamics control assembly of an extremely long bacteriophage tail tube
title_short Conformational dynamics control assembly of an extremely long bacteriophage tail tube
title_sort conformational dynamics control assembly of an extremely long bacteriophage tail tube
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10034513/
https://www.ncbi.nlm.nih.gov/pubmed/36791911
http://dx.doi.org/10.1016/j.jbc.2023.103021
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