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Conformational dynamics control assembly of an extremely long bacteriophage tail tube
Tail tube assembly is an essential step in the lifecycle of long-tailed bacteriophages. Limited structural and biophysical information has impeded an understanding of assembly and stability of their long, flexible tail tubes. The hyperthermophilic phage P74-26 is particularly intriguing as it has th...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Society for Biochemistry and Molecular Biology
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10034513/ https://www.ncbi.nlm.nih.gov/pubmed/36791911 http://dx.doi.org/10.1016/j.jbc.2023.103021 |
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author | Agnello, Emily Pajak, Joshua Liu, Xingchen Kelch, Brian A. |
author_facet | Agnello, Emily Pajak, Joshua Liu, Xingchen Kelch, Brian A. |
author_sort | Agnello, Emily |
collection | PubMed |
description | Tail tube assembly is an essential step in the lifecycle of long-tailed bacteriophages. Limited structural and biophysical information has impeded an understanding of assembly and stability of their long, flexible tail tubes. The hyperthermophilic phage P74-26 is particularly intriguing as it has the longest tail of any known virus (nearly 1 μm) and is the most thermostable known phage. Here, we use structures of the P74-26 tail tube along with an in vitro system for studying tube assembly kinetics to propose the first molecular model for the tail tube assembly of long-tailed phages. Our high-resolution cryo-EM structure provides insight into how the P74-26 phage assembles through flexible loops that fit into neighboring rings through tight “ball-and-socket”-like interactions. Guided by this structure, and in combination with mutational, light scattering, and molecular dynamics simulations data, we propose a model for the assembly of conserved tube-like structures across phage and other entities possessing tail tube–like proteins. We propose that formation of a full ring promotes the adoption of a tube elongation-competent conformation among the flexible loops and their corresponding sockets, which is further stabilized by an adjacent ring. Tail assembly is controlled by the cooperative interaction of dynamic intraring and interring contacts. Given the structural conservation among tail tube proteins and tail-like structures, our model can explain the mechanism of high-fidelity assembly of long, stable tubes. |
format | Online Article Text |
id | pubmed-10034513 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | American Society for Biochemistry and Molecular Biology |
record_format | MEDLINE/PubMed |
spelling | pubmed-100345132023-03-24 Conformational dynamics control assembly of an extremely long bacteriophage tail tube Agnello, Emily Pajak, Joshua Liu, Xingchen Kelch, Brian A. J Biol Chem Research Article Tail tube assembly is an essential step in the lifecycle of long-tailed bacteriophages. Limited structural and biophysical information has impeded an understanding of assembly and stability of their long, flexible tail tubes. The hyperthermophilic phage P74-26 is particularly intriguing as it has the longest tail of any known virus (nearly 1 μm) and is the most thermostable known phage. Here, we use structures of the P74-26 tail tube along with an in vitro system for studying tube assembly kinetics to propose the first molecular model for the tail tube assembly of long-tailed phages. Our high-resolution cryo-EM structure provides insight into how the P74-26 phage assembles through flexible loops that fit into neighboring rings through tight “ball-and-socket”-like interactions. Guided by this structure, and in combination with mutational, light scattering, and molecular dynamics simulations data, we propose a model for the assembly of conserved tube-like structures across phage and other entities possessing tail tube–like proteins. We propose that formation of a full ring promotes the adoption of a tube elongation-competent conformation among the flexible loops and their corresponding sockets, which is further stabilized by an adjacent ring. Tail assembly is controlled by the cooperative interaction of dynamic intraring and interring contacts. Given the structural conservation among tail tube proteins and tail-like structures, our model can explain the mechanism of high-fidelity assembly of long, stable tubes. American Society for Biochemistry and Molecular Biology 2023-02-13 /pmc/articles/PMC10034513/ /pubmed/36791911 http://dx.doi.org/10.1016/j.jbc.2023.103021 Text en © 2023 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Research Article Agnello, Emily Pajak, Joshua Liu, Xingchen Kelch, Brian A. Conformational dynamics control assembly of an extremely long bacteriophage tail tube |
title | Conformational dynamics control assembly of an extremely long bacteriophage tail tube |
title_full | Conformational dynamics control assembly of an extremely long bacteriophage tail tube |
title_fullStr | Conformational dynamics control assembly of an extremely long bacteriophage tail tube |
title_full_unstemmed | Conformational dynamics control assembly of an extremely long bacteriophage tail tube |
title_short | Conformational dynamics control assembly of an extremely long bacteriophage tail tube |
title_sort | conformational dynamics control assembly of an extremely long bacteriophage tail tube |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10034513/ https://www.ncbi.nlm.nih.gov/pubmed/36791911 http://dx.doi.org/10.1016/j.jbc.2023.103021 |
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