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Exploiting butyrylcholinesterase inhibitors through a combined 3-D pharmacophore modeling, QSAR, molecular docking, and molecular dynamics investigation

Alzheimer's disease (AD), a neurodegenerative condition associated with ageing, can occur. AD gradually impairs memory and cognitive function, which leads to abnormal behavior, incapacity, and reliance. By 2050, there will likely be 100 million cases of AD in the world's population. Acetyl...

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Autores principales: Kumar, Sunil, Manoharan, Amritha, J, Jayalakshmi, Abdelgawad, Mohamed A., Mahdi, Wael A., Alshehri, Sultan, Ghoneim, Mohammed M., Pappachen, Leena K., Zachariah, Subin Mary, Aneesh, T. P., Mathew, Bijo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10035067/
https://www.ncbi.nlm.nih.gov/pubmed/36968055
http://dx.doi.org/10.1039/d3ra00526g
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author Kumar, Sunil
Manoharan, Amritha
J, Jayalakshmi
Abdelgawad, Mohamed A.
Mahdi, Wael A.
Alshehri, Sultan
Ghoneim, Mohammed M.
Pappachen, Leena K.
Zachariah, Subin Mary
Aneesh, T. P.
Mathew, Bijo
author_facet Kumar, Sunil
Manoharan, Amritha
J, Jayalakshmi
Abdelgawad, Mohamed A.
Mahdi, Wael A.
Alshehri, Sultan
Ghoneim, Mohammed M.
Pappachen, Leena K.
Zachariah, Subin Mary
Aneesh, T. P.
Mathew, Bijo
author_sort Kumar, Sunil
collection PubMed
description Alzheimer's disease (AD), a neurodegenerative condition associated with ageing, can occur. AD gradually impairs memory and cognitive function, which leads to abnormal behavior, incapacity, and reliance. By 2050, there will likely be 100 million cases of AD in the world's population. Acetylcholinesterase (AChE) and butyrylcholinesterase (BuChE) inhibition are significant components of AD treatment. This work developed models using the genetic method multiple linear regression, atom-based, field-based, and 3-D pharmacophore modelling. Due to internal and external validation, all of the models have solid statistical (R(2) > 0.81 and Q(2) > 0.77) underpinnings. From a pre-plated CNS library (6055), we discovered a hit compound using virtual screening on a QSAR model. Through molecular docking, additional hit compounds were investigated (XP mode). Finally, a molecular dynamics simulation revealed that the Molecule5093-4BDS complex was stable (100 ns). Finally, the expected ADME properties for the hit compounds (Molecule5093, Molecule1076, Molecule4412, Molecule1053, and Molecule3344) were found. According to the results of our investigation and the prospective hit compounds, BuChE inhibitors may be used as a treatment for AD.
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spelling pubmed-100350672023-03-24 Exploiting butyrylcholinesterase inhibitors through a combined 3-D pharmacophore modeling, QSAR, molecular docking, and molecular dynamics investigation Kumar, Sunil Manoharan, Amritha J, Jayalakshmi Abdelgawad, Mohamed A. Mahdi, Wael A. Alshehri, Sultan Ghoneim, Mohammed M. Pappachen, Leena K. Zachariah, Subin Mary Aneesh, T. P. Mathew, Bijo RSC Adv Chemistry Alzheimer's disease (AD), a neurodegenerative condition associated with ageing, can occur. AD gradually impairs memory and cognitive function, which leads to abnormal behavior, incapacity, and reliance. By 2050, there will likely be 100 million cases of AD in the world's population. Acetylcholinesterase (AChE) and butyrylcholinesterase (BuChE) inhibition are significant components of AD treatment. This work developed models using the genetic method multiple linear regression, atom-based, field-based, and 3-D pharmacophore modelling. Due to internal and external validation, all of the models have solid statistical (R(2) > 0.81 and Q(2) > 0.77) underpinnings. From a pre-plated CNS library (6055), we discovered a hit compound using virtual screening on a QSAR model. Through molecular docking, additional hit compounds were investigated (XP mode). Finally, a molecular dynamics simulation revealed that the Molecule5093-4BDS complex was stable (100 ns). Finally, the expected ADME properties for the hit compounds (Molecule5093, Molecule1076, Molecule4412, Molecule1053, and Molecule3344) were found. According to the results of our investigation and the prospective hit compounds, BuChE inhibitors may be used as a treatment for AD. The Royal Society of Chemistry 2023-03-23 /pmc/articles/PMC10035067/ /pubmed/36968055 http://dx.doi.org/10.1039/d3ra00526g Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by/3.0/
spellingShingle Chemistry
Kumar, Sunil
Manoharan, Amritha
J, Jayalakshmi
Abdelgawad, Mohamed A.
Mahdi, Wael A.
Alshehri, Sultan
Ghoneim, Mohammed M.
Pappachen, Leena K.
Zachariah, Subin Mary
Aneesh, T. P.
Mathew, Bijo
Exploiting butyrylcholinesterase inhibitors through a combined 3-D pharmacophore modeling, QSAR, molecular docking, and molecular dynamics investigation
title Exploiting butyrylcholinesterase inhibitors through a combined 3-D pharmacophore modeling, QSAR, molecular docking, and molecular dynamics investigation
title_full Exploiting butyrylcholinesterase inhibitors through a combined 3-D pharmacophore modeling, QSAR, molecular docking, and molecular dynamics investigation
title_fullStr Exploiting butyrylcholinesterase inhibitors through a combined 3-D pharmacophore modeling, QSAR, molecular docking, and molecular dynamics investigation
title_full_unstemmed Exploiting butyrylcholinesterase inhibitors through a combined 3-D pharmacophore modeling, QSAR, molecular docking, and molecular dynamics investigation
title_short Exploiting butyrylcholinesterase inhibitors through a combined 3-D pharmacophore modeling, QSAR, molecular docking, and molecular dynamics investigation
title_sort exploiting butyrylcholinesterase inhibitors through a combined 3-d pharmacophore modeling, qsar, molecular docking, and molecular dynamics investigation
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10035067/
https://www.ncbi.nlm.nih.gov/pubmed/36968055
http://dx.doi.org/10.1039/d3ra00526g
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