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Prediction of vancomycin initial dosage using artificial intelligence models applying ensemble strategy
BACKGROUND: Antibiotic resistance has become a global concern. Vancomycin is known as the last line of antibiotics, but its treatment index is narrow. Therefore, clinical dosing decisions must be made with the utmost care; such decisions are said to be “suitable” only when both “efficacy” and “safet...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10035120/ https://www.ncbi.nlm.nih.gov/pubmed/36949378 http://dx.doi.org/10.1186/s12859-022-05117-8 |
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author | Ho, Wen-Hsien Huang, Tian-Hsiang Chen, Yenming J. Zeng, Lang-Yin Liao, Fen-Fen Liou, Yeong-Cheng |
author_facet | Ho, Wen-Hsien Huang, Tian-Hsiang Chen, Yenming J. Zeng, Lang-Yin Liao, Fen-Fen Liou, Yeong-Cheng |
author_sort | Ho, Wen-Hsien |
collection | PubMed |
description | BACKGROUND: Antibiotic resistance has become a global concern. Vancomycin is known as the last line of antibiotics, but its treatment index is narrow. Therefore, clinical dosing decisions must be made with the utmost care; such decisions are said to be “suitable” only when both “efficacy” and “safety” are considered. This study presents a model, namely the “ensemble strategy model,” to predict the suitability of vancomycin regimens. The experimental data consisted of 2141 “suitable” and “unsuitable” patients tagged with a vancomycin regimen, including six diagnostic input attributes (sex, age, weight, serum creatinine, dosing interval, and total daily dose), and the dataset was normalized into a training dataset, a validation dataset, and a test dataset. AdaBoost.M1, Bagging, fastAdaboost, Neyman–Pearson, and Stacking were used for model training. The “ensemble strategy concept” was then used to arrive at the final decision by voting to build a model for predicting the suitability of vancomycin treatment regimens. RESULTS: The results of the tenfold cross-validation showed that the average accuracy of the proposed “ensemble strategy model” was 86.51% with a standard deviation of 0.006, and it was robust. In addition, the experimental results of the test dataset revealed that the accuracy, sensitivity, and specificity of the proposed method were 87.54%, 89.25%, and 85.19%, respectively. The accuracy of the five algorithms ranged from 81 to 86%, the sensitivity from 81 to 92%, and the specificity from 77 to 88%. Thus, the experimental results suggest that the model proposed in this study has high accuracy, high sensitivity, and high specificity. CONCLUSIONS: The “ensemble strategy model” can be used as a reference for the determination of vancomycin doses in clinical treatment. |
format | Online Article Text |
id | pubmed-10035120 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-100351202023-03-24 Prediction of vancomycin initial dosage using artificial intelligence models applying ensemble strategy Ho, Wen-Hsien Huang, Tian-Hsiang Chen, Yenming J. Zeng, Lang-Yin Liao, Fen-Fen Liou, Yeong-Cheng BMC Bioinformatics Research BACKGROUND: Antibiotic resistance has become a global concern. Vancomycin is known as the last line of antibiotics, but its treatment index is narrow. Therefore, clinical dosing decisions must be made with the utmost care; such decisions are said to be “suitable” only when both “efficacy” and “safety” are considered. This study presents a model, namely the “ensemble strategy model,” to predict the suitability of vancomycin regimens. The experimental data consisted of 2141 “suitable” and “unsuitable” patients tagged with a vancomycin regimen, including six diagnostic input attributes (sex, age, weight, serum creatinine, dosing interval, and total daily dose), and the dataset was normalized into a training dataset, a validation dataset, and a test dataset. AdaBoost.M1, Bagging, fastAdaboost, Neyman–Pearson, and Stacking were used for model training. The “ensemble strategy concept” was then used to arrive at the final decision by voting to build a model for predicting the suitability of vancomycin treatment regimens. RESULTS: The results of the tenfold cross-validation showed that the average accuracy of the proposed “ensemble strategy model” was 86.51% with a standard deviation of 0.006, and it was robust. In addition, the experimental results of the test dataset revealed that the accuracy, sensitivity, and specificity of the proposed method were 87.54%, 89.25%, and 85.19%, respectively. The accuracy of the five algorithms ranged from 81 to 86%, the sensitivity from 81 to 92%, and the specificity from 77 to 88%. Thus, the experimental results suggest that the model proposed in this study has high accuracy, high sensitivity, and high specificity. CONCLUSIONS: The “ensemble strategy model” can be used as a reference for the determination of vancomycin doses in clinical treatment. BioMed Central 2023-03-22 /pmc/articles/PMC10035120/ /pubmed/36949378 http://dx.doi.org/10.1186/s12859-022-05117-8 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Ho, Wen-Hsien Huang, Tian-Hsiang Chen, Yenming J. Zeng, Lang-Yin Liao, Fen-Fen Liou, Yeong-Cheng Prediction of vancomycin initial dosage using artificial intelligence models applying ensemble strategy |
title | Prediction of vancomycin initial dosage using artificial intelligence models applying ensemble strategy |
title_full | Prediction of vancomycin initial dosage using artificial intelligence models applying ensemble strategy |
title_fullStr | Prediction of vancomycin initial dosage using artificial intelligence models applying ensemble strategy |
title_full_unstemmed | Prediction of vancomycin initial dosage using artificial intelligence models applying ensemble strategy |
title_short | Prediction of vancomycin initial dosage using artificial intelligence models applying ensemble strategy |
title_sort | prediction of vancomycin initial dosage using artificial intelligence models applying ensemble strategy |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10035120/ https://www.ncbi.nlm.nih.gov/pubmed/36949378 http://dx.doi.org/10.1186/s12859-022-05117-8 |
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