Cargando…

Correlation between SMADs and Colorectal Cancer Expression, Prognosis, and Immune Infiltrates

BACKGROUND: In recent years, the incidence and mortality of colorectal cancer (CRC) are increasing, and the 5-year survival rate of advanced metastatic CRC is poor. Small mothers against decapentaplegic (SMAD) superfamily are intracellular signal transduction proteins associated with the development...

Descripción completa

Detalles Bibliográficos
Autores principales: Ding, Ning, Luo, Hongbiao, Zhang, Tao, Peng, Tianshu, Yao, Yanru, He, Yongheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10038740/
https://www.ncbi.nlm.nih.gov/pubmed/36969909
http://dx.doi.org/10.1155/2023/8414040
_version_ 1784912149199454208
author Ding, Ning
Luo, Hongbiao
Zhang, Tao
Peng, Tianshu
Yao, Yanru
He, Yongheng
author_facet Ding, Ning
Luo, Hongbiao
Zhang, Tao
Peng, Tianshu
Yao, Yanru
He, Yongheng
author_sort Ding, Ning
collection PubMed
description BACKGROUND: In recent years, the incidence and mortality of colorectal cancer (CRC) are increasing, and the 5-year survival rate of advanced metastatic CRC is poor. Small mothers against decapentaplegic (SMAD) superfamily are intracellular signal transduction proteins associated with the development and prognosis of a variety of tumors. At present, no study has systematically analysed the relationship between SMADs and CRC. METHODS: Here, R3.6.3 was used to analyse the expression of SMADs in pan-cancer and CRC. Protein expression of SMADs were analysed by Human Protein Atlas (HPA). Gene expression profiling interactive analysis (GEPIA) was used to evaluate the correlation between SMADs and tumor stage in CRC. The effect of R language and GEPIA on prognosis was analysed. Mutation rates of SMADs in CRC were determined by cBioPortal, and potentially related genes were predicted using GeneMANIA. R analysis was used to correlate immune cell infiltration in CRC. RESULTS: Both SMAD1 and SMAD2 were found to be weakly expressed in CRC and correlated with the immune invasion level. SMAD1 was correlated with patient prognosis, and SMAD2 was correlated with tumor stage. SMAD3, SMAD4, and SMAD7 were all expressed at low levels in CRC and associated with a variety of immune cells. SMAD3 and SMAD4 proteins were also expressed at low levels, and SMAD4 had the highest mutation rate. SMAD5 and SMAD6 were overexpressed in CRC, and SMAD6 was also associated with patient overall survival (OS) and CD8+ T cells, macrophages, and neutrophils. CONCLUSIONS: Our results reveal innovative and strong evidence that SMADs can be used as biomarkers for the treatment and prognosis of CRC.
format Online
Article
Text
id pubmed-10038740
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Hindawi
record_format MEDLINE/PubMed
spelling pubmed-100387402023-03-25 Correlation between SMADs and Colorectal Cancer Expression, Prognosis, and Immune Infiltrates Ding, Ning Luo, Hongbiao Zhang, Tao Peng, Tianshu Yao, Yanru He, Yongheng Int J Anal Chem Research Article BACKGROUND: In recent years, the incidence and mortality of colorectal cancer (CRC) are increasing, and the 5-year survival rate of advanced metastatic CRC is poor. Small mothers against decapentaplegic (SMAD) superfamily are intracellular signal transduction proteins associated with the development and prognosis of a variety of tumors. At present, no study has systematically analysed the relationship between SMADs and CRC. METHODS: Here, R3.6.3 was used to analyse the expression of SMADs in pan-cancer and CRC. Protein expression of SMADs were analysed by Human Protein Atlas (HPA). Gene expression profiling interactive analysis (GEPIA) was used to evaluate the correlation between SMADs and tumor stage in CRC. The effect of R language and GEPIA on prognosis was analysed. Mutation rates of SMADs in CRC were determined by cBioPortal, and potentially related genes were predicted using GeneMANIA. R analysis was used to correlate immune cell infiltration in CRC. RESULTS: Both SMAD1 and SMAD2 were found to be weakly expressed in CRC and correlated with the immune invasion level. SMAD1 was correlated with patient prognosis, and SMAD2 was correlated with tumor stage. SMAD3, SMAD4, and SMAD7 were all expressed at low levels in CRC and associated with a variety of immune cells. SMAD3 and SMAD4 proteins were also expressed at low levels, and SMAD4 had the highest mutation rate. SMAD5 and SMAD6 were overexpressed in CRC, and SMAD6 was also associated with patient overall survival (OS) and CD8+ T cells, macrophages, and neutrophils. CONCLUSIONS: Our results reveal innovative and strong evidence that SMADs can be used as biomarkers for the treatment and prognosis of CRC. Hindawi 2023-03-08 /pmc/articles/PMC10038740/ /pubmed/36969909 http://dx.doi.org/10.1155/2023/8414040 Text en Copyright © 2023 Ning Ding et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Ding, Ning
Luo, Hongbiao
Zhang, Tao
Peng, Tianshu
Yao, Yanru
He, Yongheng
Correlation between SMADs and Colorectal Cancer Expression, Prognosis, and Immune Infiltrates
title Correlation between SMADs and Colorectal Cancer Expression, Prognosis, and Immune Infiltrates
title_full Correlation between SMADs and Colorectal Cancer Expression, Prognosis, and Immune Infiltrates
title_fullStr Correlation between SMADs and Colorectal Cancer Expression, Prognosis, and Immune Infiltrates
title_full_unstemmed Correlation between SMADs and Colorectal Cancer Expression, Prognosis, and Immune Infiltrates
title_short Correlation between SMADs and Colorectal Cancer Expression, Prognosis, and Immune Infiltrates
title_sort correlation between smads and colorectal cancer expression, prognosis, and immune infiltrates
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10038740/
https://www.ncbi.nlm.nih.gov/pubmed/36969909
http://dx.doi.org/10.1155/2023/8414040
work_keys_str_mv AT dingning correlationbetweensmadsandcolorectalcancerexpressionprognosisandimmuneinfiltrates
AT luohongbiao correlationbetweensmadsandcolorectalcancerexpressionprognosisandimmuneinfiltrates
AT zhangtao correlationbetweensmadsandcolorectalcancerexpressionprognosisandimmuneinfiltrates
AT pengtianshu correlationbetweensmadsandcolorectalcancerexpressionprognosisandimmuneinfiltrates
AT yaoyanru correlationbetweensmadsandcolorectalcancerexpressionprognosisandimmuneinfiltrates
AT heyongheng correlationbetweensmadsandcolorectalcancerexpressionprognosisandimmuneinfiltrates