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A deep generative adversarial network capturing complex spiral waves in disinhibited circuits of the cerebral cortex
BACKGROUND: In the cerebral cortex, disinhibited activity is characterized by propagating waves that spread across neural tissue. In this pathological state, a widely reported form of activity are spiral waves that travel in a circular pattern around a fixed spatial locus termed the center of mass....
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10039524/ https://www.ncbi.nlm.nih.gov/pubmed/36964493 http://dx.doi.org/10.1186/s12868-023-00792-6 |
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author | Boucher-Routhier, Megan Thivierge, Jean-Philippe |
author_facet | Boucher-Routhier, Megan Thivierge, Jean-Philippe |
author_sort | Boucher-Routhier, Megan |
collection | PubMed |
description | BACKGROUND: In the cerebral cortex, disinhibited activity is characterized by propagating waves that spread across neural tissue. In this pathological state, a widely reported form of activity are spiral waves that travel in a circular pattern around a fixed spatial locus termed the center of mass. Spiral waves exhibit stereotypical activity and involve broad patterns of co-fluctuations, suggesting that they may be of lower complexity than healthy activity. RESULTS: To evaluate this hypothesis, we performed dense multi-electrode recordings of cortical networks where disinhibition was induced by perfusing a pro-epileptiform solution containing 4-Aminopyridine as well as increased potassium and decreased magnesium. Spiral waves were identified based on a spatially delimited center of mass and a broad distribution of instantaneous phases across electrodes. Individual waves were decomposed into “snapshots” that captured instantaneous neural activation across the entire network. The complexity of these snapshots was examined using a measure termed the participation ratio. Contrary to our expectations, an eigenspectrum analysis of these snapshots revealed a broad distribution of eigenvalues and an increase in complexity compared to baseline networks. A deep generative adversarial network was trained to generate novel exemplars of snapshots that closely captured cortical spiral waves. These synthetic waves replicated key features of experimental data including a tight center of mass, a broad eigenvalue distribution, spatially-dependent correlations, and a high complexity. By adjusting the input to the model, new samples were generated that deviated in systematic ways from the experimental data, thus allowing the exploration of a broad range of states from healthy to pathologically disinhibited neural networks. CONCLUSIONS: Together, results show that the complexity of population activity serves as a marker along a continuum from healthy to disinhibited brain states. The proposed generative adversarial network opens avenues for replicating the dynamics of cortical seizures and accelerating the design of optimal neurostimulation aimed at suppressing pathological brain activity. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12868-023-00792-6. |
format | Online Article Text |
id | pubmed-10039524 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-100395242023-03-26 A deep generative adversarial network capturing complex spiral waves in disinhibited circuits of the cerebral cortex Boucher-Routhier, Megan Thivierge, Jean-Philippe BMC Neurosci Research BACKGROUND: In the cerebral cortex, disinhibited activity is characterized by propagating waves that spread across neural tissue. In this pathological state, a widely reported form of activity are spiral waves that travel in a circular pattern around a fixed spatial locus termed the center of mass. Spiral waves exhibit stereotypical activity and involve broad patterns of co-fluctuations, suggesting that they may be of lower complexity than healthy activity. RESULTS: To evaluate this hypothesis, we performed dense multi-electrode recordings of cortical networks where disinhibition was induced by perfusing a pro-epileptiform solution containing 4-Aminopyridine as well as increased potassium and decreased magnesium. Spiral waves were identified based on a spatially delimited center of mass and a broad distribution of instantaneous phases across electrodes. Individual waves were decomposed into “snapshots” that captured instantaneous neural activation across the entire network. The complexity of these snapshots was examined using a measure termed the participation ratio. Contrary to our expectations, an eigenspectrum analysis of these snapshots revealed a broad distribution of eigenvalues and an increase in complexity compared to baseline networks. A deep generative adversarial network was trained to generate novel exemplars of snapshots that closely captured cortical spiral waves. These synthetic waves replicated key features of experimental data including a tight center of mass, a broad eigenvalue distribution, spatially-dependent correlations, and a high complexity. By adjusting the input to the model, new samples were generated that deviated in systematic ways from the experimental data, thus allowing the exploration of a broad range of states from healthy to pathologically disinhibited neural networks. CONCLUSIONS: Together, results show that the complexity of population activity serves as a marker along a continuum from healthy to disinhibited brain states. The proposed generative adversarial network opens avenues for replicating the dynamics of cortical seizures and accelerating the design of optimal neurostimulation aimed at suppressing pathological brain activity. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12868-023-00792-6. BioMed Central 2023-03-24 /pmc/articles/PMC10039524/ /pubmed/36964493 http://dx.doi.org/10.1186/s12868-023-00792-6 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Boucher-Routhier, Megan Thivierge, Jean-Philippe A deep generative adversarial network capturing complex spiral waves in disinhibited circuits of the cerebral cortex |
title | A deep generative adversarial network capturing complex spiral waves in disinhibited circuits of the cerebral cortex |
title_full | A deep generative adversarial network capturing complex spiral waves in disinhibited circuits of the cerebral cortex |
title_fullStr | A deep generative adversarial network capturing complex spiral waves in disinhibited circuits of the cerebral cortex |
title_full_unstemmed | A deep generative adversarial network capturing complex spiral waves in disinhibited circuits of the cerebral cortex |
title_short | A deep generative adversarial network capturing complex spiral waves in disinhibited circuits of the cerebral cortex |
title_sort | deep generative adversarial network capturing complex spiral waves in disinhibited circuits of the cerebral cortex |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10039524/ https://www.ncbi.nlm.nih.gov/pubmed/36964493 http://dx.doi.org/10.1186/s12868-023-00792-6 |
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