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Genome-wide analysis of TPX2 gene family in Populus trichocarpa and its specific response genes under various abiotic stresses

Microtubules are essential for regulating cell morphogenesis, plant growth, and the response of plants to abiotic stresses. TPX2 proteins are the main players determining the spatiotemporally dynamic nature of the MTs. However, how TPX2 members respond to abiotic stresses in poplar remains largely u...

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Autores principales: Qi, Meng, Wang, Shengjie, Li, Na, Li, Lingfeng, Zhang, Yue, Xue, Jingyi, Wang, Jingyi, Wu, Rongling, Lian, Na
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10040543/
https://www.ncbi.nlm.nih.gov/pubmed/36993860
http://dx.doi.org/10.3389/fpls.2023.1159181
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author Qi, Meng
Wang, Shengjie
Li, Na
Li, Lingfeng
Zhang, Yue
Xue, Jingyi
Wang, Jingyi
Wu, Rongling
Lian, Na
author_facet Qi, Meng
Wang, Shengjie
Li, Na
Li, Lingfeng
Zhang, Yue
Xue, Jingyi
Wang, Jingyi
Wu, Rongling
Lian, Na
author_sort Qi, Meng
collection PubMed
description Microtubules are essential for regulating cell morphogenesis, plant growth, and the response of plants to abiotic stresses. TPX2 proteins are the main players determining the spatiotemporally dynamic nature of the MTs. However, how TPX2 members respond to abiotic stresses in poplar remains largely unknown. Herein, 19 TPX2 family members were identified from the poplar genome and analyzed the structural characteristics as well as gene expression patterns. All TPX2 members had the conserved structural characteristics, but exhibited different expression profiles in different tissues, indicating their varying roles during plant growth. Additionally, several light, hormone, and abiotic stress responsive cis-acting regulatory elements were detected on the promoters of PtTPX2 genes. Furthermore, expression analysis in various tissues of Populus trichocarpa showed that the PtTPX2 genes responded differently to heat, drought and salt stress. In summary, these results provide a comprehensive analysis for the TPX2 gene family in poplar and an effective contribution to revealing the mechanisms of PtTPX2 in the regulatory network of abiotic stress.
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spelling pubmed-100405432023-03-28 Genome-wide analysis of TPX2 gene family in Populus trichocarpa and its specific response genes under various abiotic stresses Qi, Meng Wang, Shengjie Li, Na Li, Lingfeng Zhang, Yue Xue, Jingyi Wang, Jingyi Wu, Rongling Lian, Na Front Plant Sci Plant Science Microtubules are essential for regulating cell morphogenesis, plant growth, and the response of plants to abiotic stresses. TPX2 proteins are the main players determining the spatiotemporally dynamic nature of the MTs. However, how TPX2 members respond to abiotic stresses in poplar remains largely unknown. Herein, 19 TPX2 family members were identified from the poplar genome and analyzed the structural characteristics as well as gene expression patterns. All TPX2 members had the conserved structural characteristics, but exhibited different expression profiles in different tissues, indicating their varying roles during plant growth. Additionally, several light, hormone, and abiotic stress responsive cis-acting regulatory elements were detected on the promoters of PtTPX2 genes. Furthermore, expression analysis in various tissues of Populus trichocarpa showed that the PtTPX2 genes responded differently to heat, drought and salt stress. In summary, these results provide a comprehensive analysis for the TPX2 gene family in poplar and an effective contribution to revealing the mechanisms of PtTPX2 in the regulatory network of abiotic stress. Frontiers Media S.A. 2023-03-13 /pmc/articles/PMC10040543/ /pubmed/36993860 http://dx.doi.org/10.3389/fpls.2023.1159181 Text en Copyright © 2023 Qi, Wang, Li, Li, Zhang, Xue, Wang, Wu and Lian https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Qi, Meng
Wang, Shengjie
Li, Na
Li, Lingfeng
Zhang, Yue
Xue, Jingyi
Wang, Jingyi
Wu, Rongling
Lian, Na
Genome-wide analysis of TPX2 gene family in Populus trichocarpa and its specific response genes under various abiotic stresses
title Genome-wide analysis of TPX2 gene family in Populus trichocarpa and its specific response genes under various abiotic stresses
title_full Genome-wide analysis of TPX2 gene family in Populus trichocarpa and its specific response genes under various abiotic stresses
title_fullStr Genome-wide analysis of TPX2 gene family in Populus trichocarpa and its specific response genes under various abiotic stresses
title_full_unstemmed Genome-wide analysis of TPX2 gene family in Populus trichocarpa and its specific response genes under various abiotic stresses
title_short Genome-wide analysis of TPX2 gene family in Populus trichocarpa and its specific response genes under various abiotic stresses
title_sort genome-wide analysis of tpx2 gene family in populus trichocarpa and its specific response genes under various abiotic stresses
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10040543/
https://www.ncbi.nlm.nih.gov/pubmed/36993860
http://dx.doi.org/10.3389/fpls.2023.1159181
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