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Genome-wide analysis of TPX2 gene family in Populus trichocarpa and its specific response genes under various abiotic stresses
Microtubules are essential for regulating cell morphogenesis, plant growth, and the response of plants to abiotic stresses. TPX2 proteins are the main players determining the spatiotemporally dynamic nature of the MTs. However, how TPX2 members respond to abiotic stresses in poplar remains largely u...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10040543/ https://www.ncbi.nlm.nih.gov/pubmed/36993860 http://dx.doi.org/10.3389/fpls.2023.1159181 |
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author | Qi, Meng Wang, Shengjie Li, Na Li, Lingfeng Zhang, Yue Xue, Jingyi Wang, Jingyi Wu, Rongling Lian, Na |
author_facet | Qi, Meng Wang, Shengjie Li, Na Li, Lingfeng Zhang, Yue Xue, Jingyi Wang, Jingyi Wu, Rongling Lian, Na |
author_sort | Qi, Meng |
collection | PubMed |
description | Microtubules are essential for regulating cell morphogenesis, plant growth, and the response of plants to abiotic stresses. TPX2 proteins are the main players determining the spatiotemporally dynamic nature of the MTs. However, how TPX2 members respond to abiotic stresses in poplar remains largely unknown. Herein, 19 TPX2 family members were identified from the poplar genome and analyzed the structural characteristics as well as gene expression patterns. All TPX2 members had the conserved structural characteristics, but exhibited different expression profiles in different tissues, indicating their varying roles during plant growth. Additionally, several light, hormone, and abiotic stress responsive cis-acting regulatory elements were detected on the promoters of PtTPX2 genes. Furthermore, expression analysis in various tissues of Populus trichocarpa showed that the PtTPX2 genes responded differently to heat, drought and salt stress. In summary, these results provide a comprehensive analysis for the TPX2 gene family in poplar and an effective contribution to revealing the mechanisms of PtTPX2 in the regulatory network of abiotic stress. |
format | Online Article Text |
id | pubmed-10040543 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-100405432023-03-28 Genome-wide analysis of TPX2 gene family in Populus trichocarpa and its specific response genes under various abiotic stresses Qi, Meng Wang, Shengjie Li, Na Li, Lingfeng Zhang, Yue Xue, Jingyi Wang, Jingyi Wu, Rongling Lian, Na Front Plant Sci Plant Science Microtubules are essential for regulating cell morphogenesis, plant growth, and the response of plants to abiotic stresses. TPX2 proteins are the main players determining the spatiotemporally dynamic nature of the MTs. However, how TPX2 members respond to abiotic stresses in poplar remains largely unknown. Herein, 19 TPX2 family members were identified from the poplar genome and analyzed the structural characteristics as well as gene expression patterns. All TPX2 members had the conserved structural characteristics, but exhibited different expression profiles in different tissues, indicating their varying roles during plant growth. Additionally, several light, hormone, and abiotic stress responsive cis-acting regulatory elements were detected on the promoters of PtTPX2 genes. Furthermore, expression analysis in various tissues of Populus trichocarpa showed that the PtTPX2 genes responded differently to heat, drought and salt stress. In summary, these results provide a comprehensive analysis for the TPX2 gene family in poplar and an effective contribution to revealing the mechanisms of PtTPX2 in the regulatory network of abiotic stress. Frontiers Media S.A. 2023-03-13 /pmc/articles/PMC10040543/ /pubmed/36993860 http://dx.doi.org/10.3389/fpls.2023.1159181 Text en Copyright © 2023 Qi, Wang, Li, Li, Zhang, Xue, Wang, Wu and Lian https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science Qi, Meng Wang, Shengjie Li, Na Li, Lingfeng Zhang, Yue Xue, Jingyi Wang, Jingyi Wu, Rongling Lian, Na Genome-wide analysis of TPX2 gene family in Populus trichocarpa and its specific response genes under various abiotic stresses |
title | Genome-wide analysis of TPX2 gene family in Populus trichocarpa and its specific response genes under various abiotic stresses |
title_full | Genome-wide analysis of TPX2 gene family in Populus trichocarpa and its specific response genes under various abiotic stresses |
title_fullStr | Genome-wide analysis of TPX2 gene family in Populus trichocarpa and its specific response genes under various abiotic stresses |
title_full_unstemmed | Genome-wide analysis of TPX2 gene family in Populus trichocarpa and its specific response genes under various abiotic stresses |
title_short | Genome-wide analysis of TPX2 gene family in Populus trichocarpa and its specific response genes under various abiotic stresses |
title_sort | genome-wide analysis of tpx2 gene family in populus trichocarpa and its specific response genes under various abiotic stresses |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10040543/ https://www.ncbi.nlm.nih.gov/pubmed/36993860 http://dx.doi.org/10.3389/fpls.2023.1159181 |
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