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Colorimetric Determination of Adenylation Domain Activity in Nonribosomal Peptide Synthetases by Using Chrome Azurol S

Adenylation domains are the main contributor to structural complexity among nonribosomal peptides due to their varied but stringent substrate selection. Several in vitro assays to determine the substrate specificity of these dedicated biocatalysts have been implemented, but high sensitivity is often...

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Detalles Bibliográficos
Autores principales: Kahlert, Lukas, Lichstrahl, Michael S., Townsend, Craig A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10041650/
https://www.ncbi.nlm.nih.gov/pubmed/36511946
http://dx.doi.org/10.1002/cbic.202200668
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author Kahlert, Lukas
Lichstrahl, Michael S.
Townsend, Craig A.
author_facet Kahlert, Lukas
Lichstrahl, Michael S.
Townsend, Craig A.
author_sort Kahlert, Lukas
collection PubMed
description Adenylation domains are the main contributor to structural complexity among nonribosomal peptides due to their varied but stringent substrate selection. Several in vitro assays to determine the substrate specificity of these dedicated biocatalysts have been implemented, but high sensitivity is often accompanied by the cost of laborious procedures, expensive reagents or the requirement for auxiliary enzymes. Here, we describe a simple protocol that is based on the removal of ferric iron from a preformed chromogenic complex between ferric iron and Chrome Azurol S. Adenylation activity can be rapidly followed by a decrease in absorbance at 630 nm, visualized by a prominent color change from blue to orange.
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spelling pubmed-100416502023-06-01 Colorimetric Determination of Adenylation Domain Activity in Nonribosomal Peptide Synthetases by Using Chrome Azurol S Kahlert, Lukas Lichstrahl, Michael S. Townsend, Craig A. Chembiochem Article Adenylation domains are the main contributor to structural complexity among nonribosomal peptides due to their varied but stringent substrate selection. Several in vitro assays to determine the substrate specificity of these dedicated biocatalysts have been implemented, but high sensitivity is often accompanied by the cost of laborious procedures, expensive reagents or the requirement for auxiliary enzymes. Here, we describe a simple protocol that is based on the removal of ferric iron from a preformed chromogenic complex between ferric iron and Chrome Azurol S. Adenylation activity can be rapidly followed by a decrease in absorbance at 630 nm, visualized by a prominent color change from blue to orange. 2023-03-01 2023-01-26 /pmc/articles/PMC10041650/ /pubmed/36511946 http://dx.doi.org/10.1002/cbic.202200668 Text en https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the Creative Commons Attribution Non-Commercial License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Article
Kahlert, Lukas
Lichstrahl, Michael S.
Townsend, Craig A.
Colorimetric Determination of Adenylation Domain Activity in Nonribosomal Peptide Synthetases by Using Chrome Azurol S
title Colorimetric Determination of Adenylation Domain Activity in Nonribosomal Peptide Synthetases by Using Chrome Azurol S
title_full Colorimetric Determination of Adenylation Domain Activity in Nonribosomal Peptide Synthetases by Using Chrome Azurol S
title_fullStr Colorimetric Determination of Adenylation Domain Activity in Nonribosomal Peptide Synthetases by Using Chrome Azurol S
title_full_unstemmed Colorimetric Determination of Adenylation Domain Activity in Nonribosomal Peptide Synthetases by Using Chrome Azurol S
title_short Colorimetric Determination of Adenylation Domain Activity in Nonribosomal Peptide Synthetases by Using Chrome Azurol S
title_sort colorimetric determination of adenylation domain activity in nonribosomal peptide synthetases by using chrome azurol s
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10041650/
https://www.ncbi.nlm.nih.gov/pubmed/36511946
http://dx.doi.org/10.1002/cbic.202200668
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