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A fast, sensitive and fluorescent LPMO activity assay
Lytic polysaccharide monooxygenases (LPMOs) are industrially relevant enzymes that utilize a copper co-factor and an oxygen species to break down recalcitrant polysaccharides. These enzymes are secreted by microorganisms and are used in lignocellulosic refineries. As such, they are interesting from...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10043361/ https://www.ncbi.nlm.nih.gov/pubmed/36998406 http://dx.doi.org/10.3389/fmicb.2023.1128470 |
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author | Ipsen, Johan Ø. Johansen, Katja S. Brander, Søren |
author_facet | Ipsen, Johan Ø. Johansen, Katja S. Brander, Søren |
author_sort | Ipsen, Johan Ø. |
collection | PubMed |
description | Lytic polysaccharide monooxygenases (LPMOs) are industrially relevant enzymes that utilize a copper co-factor and an oxygen species to break down recalcitrant polysaccharides. These enzymes are secreted by microorganisms and are used in lignocellulosic refineries. As such, they are interesting from both the ecological/biological and industrial perspectives. Here we describe the development of a new fluorescence-based kinetic LPMO activity assay. The assay is based on the enzymatic production of fluorescein from its reduced counterpart. The assay can detect as little as 1 nM LPMO with optimized assay conditions. Furthermore, the reduced fluorescein substrate can also be used to identify peroxidase activity as seen by the formation of fluorescein by horseradish peroxidase. The assay was shown to work well at relatively low H(2)O(2) and dehydroascorbate concentrations. The applicability of the assay was demonstrated. |
format | Online Article Text |
id | pubmed-10043361 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-100433612023-03-29 A fast, sensitive and fluorescent LPMO activity assay Ipsen, Johan Ø. Johansen, Katja S. Brander, Søren Front Microbiol Microbiology Lytic polysaccharide monooxygenases (LPMOs) are industrially relevant enzymes that utilize a copper co-factor and an oxygen species to break down recalcitrant polysaccharides. These enzymes are secreted by microorganisms and are used in lignocellulosic refineries. As such, they are interesting from both the ecological/biological and industrial perspectives. Here we describe the development of a new fluorescence-based kinetic LPMO activity assay. The assay is based on the enzymatic production of fluorescein from its reduced counterpart. The assay can detect as little as 1 nM LPMO with optimized assay conditions. Furthermore, the reduced fluorescein substrate can also be used to identify peroxidase activity as seen by the formation of fluorescein by horseradish peroxidase. The assay was shown to work well at relatively low H(2)O(2) and dehydroascorbate concentrations. The applicability of the assay was demonstrated. Frontiers Media S.A. 2023-03-14 /pmc/articles/PMC10043361/ /pubmed/36998406 http://dx.doi.org/10.3389/fmicb.2023.1128470 Text en Copyright © 2023 Ipsen, Johansen and Brander. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Ipsen, Johan Ø. Johansen, Katja S. Brander, Søren A fast, sensitive and fluorescent LPMO activity assay |
title | A fast, sensitive and fluorescent LPMO activity assay |
title_full | A fast, sensitive and fluorescent LPMO activity assay |
title_fullStr | A fast, sensitive and fluorescent LPMO activity assay |
title_full_unstemmed | A fast, sensitive and fluorescent LPMO activity assay |
title_short | A fast, sensitive and fluorescent LPMO activity assay |
title_sort | fast, sensitive and fluorescent lpmo activity assay |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10043361/ https://www.ncbi.nlm.nih.gov/pubmed/36998406 http://dx.doi.org/10.3389/fmicb.2023.1128470 |
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