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The first genome assembly of the amphibian nematode parasite (Aplectana chamaeleonis)
Cosmocercoid nematodes are common parasites of the digestive tract of amphibians. Genomic resources are important for understanding the evolution of a species and the molecular mechanisms of parasite adaptation. So far, no genome resource of Cosmocercoid has been reported. In 2020, a massive Cosmoce...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
GigaScience Press
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10043924/ https://www.ncbi.nlm.nih.gov/pubmed/36999120 http://dx.doi.org/10.46471/gigabyte.79 |
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author | Han, Lei Liu, Tianlu He, Fengping Hou, Zhijun |
author_facet | Han, Lei Liu, Tianlu He, Fengping Hou, Zhijun |
author_sort | Han, Lei |
collection | PubMed |
description | Cosmocercoid nematodes are common parasites of the digestive tract of amphibians. Genomic resources are important for understanding the evolution of a species and the molecular mechanisms of parasite adaptation. So far, no genome resource of Cosmocercoid has been reported. In 2020, a massive Cosmocercoid infection was found in the small intestine of a toad, causing severe intestinal blockage. We morphologically identified this parasite as A. chamaeleonis. Here, we report the first A. chamaeleonis genome with a genome size of 1.04 Gb. The repeat content of this A. chamaeleonis genome is 72.45%, and the total length is 751 Mb. This resource is fundamental for understanding the evolution of Cosmocercoid and provides the molecular basis for Cosmocercoid infection and control. |
format | Online Article Text |
id | pubmed-10043924 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | GigaScience Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-100439242023-03-29 The first genome assembly of the amphibian nematode parasite (Aplectana chamaeleonis) Han, Lei Liu, Tianlu He, Fengping Hou, Zhijun GigaByte Data Release Cosmocercoid nematodes are common parasites of the digestive tract of amphibians. Genomic resources are important for understanding the evolution of a species and the molecular mechanisms of parasite adaptation. So far, no genome resource of Cosmocercoid has been reported. In 2020, a massive Cosmocercoid infection was found in the small intestine of a toad, causing severe intestinal blockage. We morphologically identified this parasite as A. chamaeleonis. Here, we report the first A. chamaeleonis genome with a genome size of 1.04 Gb. The repeat content of this A. chamaeleonis genome is 72.45%, and the total length is 751 Mb. This resource is fundamental for understanding the evolution of Cosmocercoid and provides the molecular basis for Cosmocercoid infection and control. GigaScience Press 2023-03-27 /pmc/articles/PMC10043924/ /pubmed/36999120 http://dx.doi.org/10.46471/gigabyte.79 Text en © The Author(s) 2023. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Data Release Han, Lei Liu, Tianlu He, Fengping Hou, Zhijun The first genome assembly of the amphibian nematode parasite (Aplectana chamaeleonis) |
title | The first genome assembly of the amphibian nematode parasite (Aplectana chamaeleonis) |
title_full | The first genome assembly of the amphibian nematode parasite (Aplectana chamaeleonis) |
title_fullStr | The first genome assembly of the amphibian nematode parasite (Aplectana chamaeleonis) |
title_full_unstemmed | The first genome assembly of the amphibian nematode parasite (Aplectana chamaeleonis) |
title_short | The first genome assembly of the amphibian nematode parasite (Aplectana chamaeleonis) |
title_sort | first genome assembly of the amphibian nematode parasite (aplectana chamaeleonis) |
topic | Data Release |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10043924/ https://www.ncbi.nlm.nih.gov/pubmed/36999120 http://dx.doi.org/10.46471/gigabyte.79 |
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