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The first genome assembly of the amphibian nematode parasite (Aplectana chamaeleonis)

Cosmocercoid nematodes are common parasites of the digestive tract of amphibians. Genomic resources are important for understanding the evolution of a species and the molecular mechanisms of parasite adaptation. So far, no genome resource of Cosmocercoid has been reported. In 2020, a massive Cosmoce...

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Detalles Bibliográficos
Autores principales: Han, Lei, Liu, Tianlu, He, Fengping, Hou, Zhijun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: GigaScience Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10043924/
https://www.ncbi.nlm.nih.gov/pubmed/36999120
http://dx.doi.org/10.46471/gigabyte.79
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author Han, Lei
Liu, Tianlu
He, Fengping
Hou, Zhijun
author_facet Han, Lei
Liu, Tianlu
He, Fengping
Hou, Zhijun
author_sort Han, Lei
collection PubMed
description Cosmocercoid nematodes are common parasites of the digestive tract of amphibians. Genomic resources are important for understanding the evolution of a species and the molecular mechanisms of parasite adaptation. So far, no genome resource of Cosmocercoid has been reported. In 2020, a massive Cosmocercoid infection was found in the small intestine of a toad, causing severe intestinal blockage. We morphologically identified this parasite as A. chamaeleonis. Here, we report the first A. chamaeleonis genome with a genome size of 1.04 Gb. The repeat content of this A. chamaeleonis genome is 72.45%, and the total length is 751 Mb. This resource is fundamental for understanding the evolution of Cosmocercoid and provides the molecular basis for Cosmocercoid infection and control.
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spelling pubmed-100439242023-03-29 The first genome assembly of the amphibian nematode parasite (Aplectana chamaeleonis) Han, Lei Liu, Tianlu He, Fengping Hou, Zhijun GigaByte Data Release Cosmocercoid nematodes are common parasites of the digestive tract of amphibians. Genomic resources are important for understanding the evolution of a species and the molecular mechanisms of parasite adaptation. So far, no genome resource of Cosmocercoid has been reported. In 2020, a massive Cosmocercoid infection was found in the small intestine of a toad, causing severe intestinal blockage. We morphologically identified this parasite as A. chamaeleonis. Here, we report the first A. chamaeleonis genome with a genome size of 1.04 Gb. The repeat content of this A. chamaeleonis genome is 72.45%, and the total length is 751 Mb. This resource is fundamental for understanding the evolution of Cosmocercoid and provides the molecular basis for Cosmocercoid infection and control. GigaScience Press 2023-03-27 /pmc/articles/PMC10043924/ /pubmed/36999120 http://dx.doi.org/10.46471/gigabyte.79 Text en © The Author(s) 2023. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Data Release
Han, Lei
Liu, Tianlu
He, Fengping
Hou, Zhijun
The first genome assembly of the amphibian nematode parasite (Aplectana chamaeleonis)
title The first genome assembly of the amphibian nematode parasite (Aplectana chamaeleonis)
title_full The first genome assembly of the amphibian nematode parasite (Aplectana chamaeleonis)
title_fullStr The first genome assembly of the amphibian nematode parasite (Aplectana chamaeleonis)
title_full_unstemmed The first genome assembly of the amphibian nematode parasite (Aplectana chamaeleonis)
title_short The first genome assembly of the amphibian nematode parasite (Aplectana chamaeleonis)
title_sort first genome assembly of the amphibian nematode parasite (aplectana chamaeleonis)
topic Data Release
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10043924/
https://www.ncbi.nlm.nih.gov/pubmed/36999120
http://dx.doi.org/10.46471/gigabyte.79
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