Characterization of the chloroplast genome of Symbiochlorum hainanensis (Ulvophyceae, Chlorophyta) and its phylogenetic analysis

Symbiochlorum hainandiae S.Q. Gong & Z.Y. Li, 2018 is a unicellular green alga belonging to Ulvophyceae, Chlorophyta, and plays important roles in coral reef ecosystem. In this study, high-throughput sequencing technology is used to sequence and assemble the chloroplast genome of S. hainandiae....

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Detalles Bibliográficos
Autores principales: Yang, Fangfang, Huang, Yi, Long, Lijuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2023
Materias:
Plastome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10044315/
https://www.ncbi.nlm.nih.gov/pubmed/36998784
http://dx.doi.org/10.1080/23802359.2023.2183722
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author Yang, Fangfang
Huang, Yi
Long, Lijuan
author_facet Yang, Fangfang
Huang, Yi
Long, Lijuan
author_sort Yang, Fangfang
collection PubMed
description Symbiochlorum hainandiae S.Q. Gong & Z.Y. Li, 2018 is a unicellular green alga belonging to Ulvophyceae, Chlorophyta, and plays important roles in coral reef ecosystem. In this study, high-throughput sequencing technology is used to sequence and assemble the chloroplast genome of S. hainandiae. The complete chloroplast genome of S. hainandiae was 158, 96 bp with the GC content of 32.86%. A total of 126 genes were identified, including 98 protein-coding genes, 26 tRNA, and 2 rRNA genes. The inverted repeat region was lost in the complete chloroplast genome of S. hainandiae. The phylogenetic analysis supports that S. hainandiae is a new sister lineage to the genus Ignatius within the class Ulvophyceae.
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spelling pubmed-100443152023-03-29 Characterization of the chloroplast genome of Symbiochlorum hainanensis (Ulvophyceae, Chlorophyta) and its phylogenetic analysis Yang, Fangfang Huang, Yi Long, Lijuan Mitochondrial DNA B Resour Plastome Announcement Symbiochlorum hainandiae S.Q. Gong & Z.Y. Li, 2018 is a unicellular green alga belonging to Ulvophyceae, Chlorophyta, and plays important roles in coral reef ecosystem. In this study, high-throughput sequencing technology is used to sequence and assemble the chloroplast genome of S. hainandiae. The complete chloroplast genome of S. hainandiae was 158, 96 bp with the GC content of 32.86%. A total of 126 genes were identified, including 98 protein-coding genes, 26 tRNA, and 2 rRNA genes. The inverted repeat region was lost in the complete chloroplast genome of S. hainandiae. The phylogenetic analysis supports that S. hainandiae is a new sister lineage to the genus Ignatius within the class Ulvophyceae. Taylor & Francis 2023-03-25 /pmc/articles/PMC10044315/ /pubmed/36998784 http://dx.doi.org/10.1080/23802359.2023.2183722 Text en © 2023 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The terms on which this article has been published allow the posting of the Accepted Manuscript in a repository by the author(s) or with their consent.
spellingShingle Plastome Announcement
Yang, Fangfang
Huang, Yi
Long, Lijuan
Characterization of the chloroplast genome of Symbiochlorum hainanensis (Ulvophyceae, Chlorophyta) and its phylogenetic analysis
title Characterization of the chloroplast genome of Symbiochlorum hainanensis (Ulvophyceae, Chlorophyta) and its phylogenetic analysis
title_full Characterization of the chloroplast genome of Symbiochlorum hainanensis (Ulvophyceae, Chlorophyta) and its phylogenetic analysis
title_fullStr Characterization of the chloroplast genome of Symbiochlorum hainanensis (Ulvophyceae, Chlorophyta) and its phylogenetic analysis
title_full_unstemmed Characterization of the chloroplast genome of Symbiochlorum hainanensis (Ulvophyceae, Chlorophyta) and its phylogenetic analysis
title_short Characterization of the chloroplast genome of Symbiochlorum hainanensis (Ulvophyceae, Chlorophyta) and its phylogenetic analysis
title_sort characterization of the chloroplast genome of symbiochlorum hainanensis (ulvophyceae, chlorophyta) and its phylogenetic analysis
topic Plastome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10044315/
https://www.ncbi.nlm.nih.gov/pubmed/36998784
http://dx.doi.org/10.1080/23802359.2023.2183722
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AT longlijuan characterizationofthechloroplastgenomeofsymbiochlorumhainanensisulvophyceaechlorophytaanditsphylogeneticanalysis

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