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Machine Learning Diffuse Optical Tomography Using Extreme Gradient Boosting and Genetic Programming

Diffuse optical tomography (DOT) is a non-invasive method for detecting breast cancer; however, it struggles to produce high-quality images due to the complexity of scattered light and the limitations of traditional image reconstruction algorithms. These algorithms can be affected by boundary condit...

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Autores principales: Hauptman, Ami, Balasubramaniam, Ganesh M., Arnon, Shlomi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10045273/
https://www.ncbi.nlm.nih.gov/pubmed/36978773
http://dx.doi.org/10.3390/bioengineering10030382
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author Hauptman, Ami
Balasubramaniam, Ganesh M.
Arnon, Shlomi
author_facet Hauptman, Ami
Balasubramaniam, Ganesh M.
Arnon, Shlomi
author_sort Hauptman, Ami
collection PubMed
description Diffuse optical tomography (DOT) is a non-invasive method for detecting breast cancer; however, it struggles to produce high-quality images due to the complexity of scattered light and the limitations of traditional image reconstruction algorithms. These algorithms can be affected by boundary conditions and have a low imaging accuracy, a shallow imaging depth, a long computation time, and a high signal-to-noise ratio. However, machine learning can potentially improve the performance of DOT by being better equipped to solve inverse problems, perform regression, classify medical images, and reconstruct biomedical images. In this study, we utilized a machine learning model called “XGBoost” to detect tumors in inhomogeneous breasts and applied a post-processing technique based on genetic programming to improve accuracy. The proposed algorithm was tested using simulated DOT measurements from complex inhomogeneous breasts and evaluated using the cosine similarity metrics and root mean square error loss. The results showed that the use of XGBoost and genetic programming in DOT could lead to more accurate and non-invasive detection of tumors in inhomogeneous breasts compared to traditional methods, with the reconstructed breasts having an average cosine similarity of more than 0.97 ± 0.07 and average root mean square error of around 0.1270 ± 0.0031 compared to the ground truth.
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spelling pubmed-100452732023-03-29 Machine Learning Diffuse Optical Tomography Using Extreme Gradient Boosting and Genetic Programming Hauptman, Ami Balasubramaniam, Ganesh M. Arnon, Shlomi Bioengineering (Basel) Article Diffuse optical tomography (DOT) is a non-invasive method for detecting breast cancer; however, it struggles to produce high-quality images due to the complexity of scattered light and the limitations of traditional image reconstruction algorithms. These algorithms can be affected by boundary conditions and have a low imaging accuracy, a shallow imaging depth, a long computation time, and a high signal-to-noise ratio. However, machine learning can potentially improve the performance of DOT by being better equipped to solve inverse problems, perform regression, classify medical images, and reconstruct biomedical images. In this study, we utilized a machine learning model called “XGBoost” to detect tumors in inhomogeneous breasts and applied a post-processing technique based on genetic programming to improve accuracy. The proposed algorithm was tested using simulated DOT measurements from complex inhomogeneous breasts and evaluated using the cosine similarity metrics and root mean square error loss. The results showed that the use of XGBoost and genetic programming in DOT could lead to more accurate and non-invasive detection of tumors in inhomogeneous breasts compared to traditional methods, with the reconstructed breasts having an average cosine similarity of more than 0.97 ± 0.07 and average root mean square error of around 0.1270 ± 0.0031 compared to the ground truth. MDPI 2023-03-21 /pmc/articles/PMC10045273/ /pubmed/36978773 http://dx.doi.org/10.3390/bioengineering10030382 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Hauptman, Ami
Balasubramaniam, Ganesh M.
Arnon, Shlomi
Machine Learning Diffuse Optical Tomography Using Extreme Gradient Boosting and Genetic Programming
title Machine Learning Diffuse Optical Tomography Using Extreme Gradient Boosting and Genetic Programming
title_full Machine Learning Diffuse Optical Tomography Using Extreme Gradient Boosting and Genetic Programming
title_fullStr Machine Learning Diffuse Optical Tomography Using Extreme Gradient Boosting and Genetic Programming
title_full_unstemmed Machine Learning Diffuse Optical Tomography Using Extreme Gradient Boosting and Genetic Programming
title_short Machine Learning Diffuse Optical Tomography Using Extreme Gradient Boosting and Genetic Programming
title_sort machine learning diffuse optical tomography using extreme gradient boosting and genetic programming
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10045273/
https://www.ncbi.nlm.nih.gov/pubmed/36978773
http://dx.doi.org/10.3390/bioengineering10030382
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