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Comparison of Broth Microdilution, Disk Diffusion and Strip Test Methods for Cefiderocol Antimicrobial Susceptibility Testing on KPC-Producing Klebsiella pneumoniae

The aim of this study was to compare the reference broth microdilution (BMD) method with the Disk Diffusion (DD) test and strip test against a collection of 75 well-characterized Klebsiella pneumoniae carbapenemase (KPC)-producing Klebsiella pneumoniae (KPC-Kp) clinical strains to assess cefiderocol...

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Autores principales: Bovo, Federica, Lazzarotto, Tiziana, Ambretti, Simone, Gaibani, Paolo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10045316/
https://www.ncbi.nlm.nih.gov/pubmed/36978482
http://dx.doi.org/10.3390/antibiotics12030614
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author Bovo, Federica
Lazzarotto, Tiziana
Ambretti, Simone
Gaibani, Paolo
author_facet Bovo, Federica
Lazzarotto, Tiziana
Ambretti, Simone
Gaibani, Paolo
author_sort Bovo, Federica
collection PubMed
description The aim of this study was to compare the reference broth microdilution (BMD) method with the Disk Diffusion (DD) test and strip test against a collection of 75 well-characterized Klebsiella pneumoniae carbapenemase (KPC)-producing Klebsiella pneumoniae (KPC-Kp) clinical strains to assess cefiderocol (CFD) antimicrobial activity. Whole-genome sequencing was performed on KPC-Kp strains by Illumina iSeq100 platform. The Categorical Agreement (CA) between the BMD method and DD test was 92% (69/75) with a Major Error (ME) of 16.7% (6/36). Additionally, the CA between the BMD method and test strip was 90.7% (68/75) with a Very Major Error (VME) of 17.9% (7/39) and 82.7% (62/75) between the strip test and DD with a ME of 30.2%. KPC-Kp strains showing resistance to CFD were 27 out of 75 (36%) by three methods. Specifically, 51.9% (14/27) of KPC-Kp resistant to CFD harbored bla(KPC-3), while 48.1% (13/27) harbored mutated bla(KPC-3). Moreover, KPC-Kp strains carrying a mutated bla(KPC-3) gene exhibited high MIC values (p value < 0.001) compared to wild-type bla(KPC-3). In conclusion, the DD test resulted as a valid alternative to the BMD method to determine the in vitro susceptibility to CFD, while the strip test exhibited major limitations.
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spelling pubmed-100453162023-03-29 Comparison of Broth Microdilution, Disk Diffusion and Strip Test Methods for Cefiderocol Antimicrobial Susceptibility Testing on KPC-Producing Klebsiella pneumoniae Bovo, Federica Lazzarotto, Tiziana Ambretti, Simone Gaibani, Paolo Antibiotics (Basel) Communication The aim of this study was to compare the reference broth microdilution (BMD) method with the Disk Diffusion (DD) test and strip test against a collection of 75 well-characterized Klebsiella pneumoniae carbapenemase (KPC)-producing Klebsiella pneumoniae (KPC-Kp) clinical strains to assess cefiderocol (CFD) antimicrobial activity. Whole-genome sequencing was performed on KPC-Kp strains by Illumina iSeq100 platform. The Categorical Agreement (CA) between the BMD method and DD test was 92% (69/75) with a Major Error (ME) of 16.7% (6/36). Additionally, the CA between the BMD method and test strip was 90.7% (68/75) with a Very Major Error (VME) of 17.9% (7/39) and 82.7% (62/75) between the strip test and DD with a ME of 30.2%. KPC-Kp strains showing resistance to CFD were 27 out of 75 (36%) by three methods. Specifically, 51.9% (14/27) of KPC-Kp resistant to CFD harbored bla(KPC-3), while 48.1% (13/27) harbored mutated bla(KPC-3). Moreover, KPC-Kp strains carrying a mutated bla(KPC-3) gene exhibited high MIC values (p value < 0.001) compared to wild-type bla(KPC-3). In conclusion, the DD test resulted as a valid alternative to the BMD method to determine the in vitro susceptibility to CFD, while the strip test exhibited major limitations. MDPI 2023-03-20 /pmc/articles/PMC10045316/ /pubmed/36978482 http://dx.doi.org/10.3390/antibiotics12030614 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Communication
Bovo, Federica
Lazzarotto, Tiziana
Ambretti, Simone
Gaibani, Paolo
Comparison of Broth Microdilution, Disk Diffusion and Strip Test Methods for Cefiderocol Antimicrobial Susceptibility Testing on KPC-Producing Klebsiella pneumoniae
title Comparison of Broth Microdilution, Disk Diffusion and Strip Test Methods for Cefiderocol Antimicrobial Susceptibility Testing on KPC-Producing Klebsiella pneumoniae
title_full Comparison of Broth Microdilution, Disk Diffusion and Strip Test Methods for Cefiderocol Antimicrobial Susceptibility Testing on KPC-Producing Klebsiella pneumoniae
title_fullStr Comparison of Broth Microdilution, Disk Diffusion and Strip Test Methods for Cefiderocol Antimicrobial Susceptibility Testing on KPC-Producing Klebsiella pneumoniae
title_full_unstemmed Comparison of Broth Microdilution, Disk Diffusion and Strip Test Methods for Cefiderocol Antimicrobial Susceptibility Testing on KPC-Producing Klebsiella pneumoniae
title_short Comparison of Broth Microdilution, Disk Diffusion and Strip Test Methods for Cefiderocol Antimicrobial Susceptibility Testing on KPC-Producing Klebsiella pneumoniae
title_sort comparison of broth microdilution, disk diffusion and strip test methods for cefiderocol antimicrobial susceptibility testing on kpc-producing klebsiella pneumoniae
topic Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10045316/
https://www.ncbi.nlm.nih.gov/pubmed/36978482
http://dx.doi.org/10.3390/antibiotics12030614
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