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Low-Temperature Loop-Mediated Isothermal Amplification Operating at Physiological Temperature

Loop-mediated isothermal amplification (LAMP) is one of the most widely used isothermal amplification technologies in molecular diagnostics. However, LAMP operates at a high temperature of 65 °C; thus, operating LAMP at a lower temperature is desirable to maximize its usefulness for on-site diagnosi...

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Autores principales: Nam, Daehan, Kim, Seokjoon, Kim, Jung Ho, Lee, Seungjin, Kim, Daneub, Son, Jinseo, Kim, Doyeon, Cha, Byung Seok, Lee, Eun Sung, Park, Ki Soo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10046060/
https://www.ncbi.nlm.nih.gov/pubmed/36979579
http://dx.doi.org/10.3390/bios13030367
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author Nam, Daehan
Kim, Seokjoon
Kim, Jung Ho
Lee, Seungjin
Kim, Daneub
Son, Jinseo
Kim, Doyeon
Cha, Byung Seok
Lee, Eun Sung
Park, Ki Soo
author_facet Nam, Daehan
Kim, Seokjoon
Kim, Jung Ho
Lee, Seungjin
Kim, Daneub
Son, Jinseo
Kim, Doyeon
Cha, Byung Seok
Lee, Eun Sung
Park, Ki Soo
author_sort Nam, Daehan
collection PubMed
description Loop-mediated isothermal amplification (LAMP) is one of the most widely used isothermal amplification technologies in molecular diagnostics. However, LAMP operates at a high temperature of 65 °C; thus, operating LAMP at a lower temperature is desirable to maximize its usefulness for on-site diagnosis. In this study, we propose a new version of LAMP, termed low-temperature LAMP, which operates at the physiological temperature of 37 °C. Low-temperature LAMP differs from conventional LAMP operating at 65 °C in terms of the concentrations of MgSO(4) and deoxyribonucleoside triphosphates (dNTPs), as well as the lengths of DNA probes, which are crucial for the execution of low-temperature LAMP. Under the optimal conditions, the amplification efficiency of low-temperature LAMP is comparable to that of conventional LAMP. In addition, the ligation reaction at 37 °C, which is necessary to detect actual target nucleic acids, is combined without altering the temperature, enabling the identification of miR-21, a cancer-promoting oncogenic miRNA, with high sensitivity and selectivity. The method described in this paper does not require expensive DNA modifications or special additives and would facilitate the widespread application of LAMP in facility-limited or point-of-care settings, paving the way to improvements in other isothermal-amplification-based techniques.
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spelling pubmed-100460602023-03-29 Low-Temperature Loop-Mediated Isothermal Amplification Operating at Physiological Temperature Nam, Daehan Kim, Seokjoon Kim, Jung Ho Lee, Seungjin Kim, Daneub Son, Jinseo Kim, Doyeon Cha, Byung Seok Lee, Eun Sung Park, Ki Soo Biosensors (Basel) Article Loop-mediated isothermal amplification (LAMP) is one of the most widely used isothermal amplification technologies in molecular diagnostics. However, LAMP operates at a high temperature of 65 °C; thus, operating LAMP at a lower temperature is desirable to maximize its usefulness for on-site diagnosis. In this study, we propose a new version of LAMP, termed low-temperature LAMP, which operates at the physiological temperature of 37 °C. Low-temperature LAMP differs from conventional LAMP operating at 65 °C in terms of the concentrations of MgSO(4) and deoxyribonucleoside triphosphates (dNTPs), as well as the lengths of DNA probes, which are crucial for the execution of low-temperature LAMP. Under the optimal conditions, the amplification efficiency of low-temperature LAMP is comparable to that of conventional LAMP. In addition, the ligation reaction at 37 °C, which is necessary to detect actual target nucleic acids, is combined without altering the temperature, enabling the identification of miR-21, a cancer-promoting oncogenic miRNA, with high sensitivity and selectivity. The method described in this paper does not require expensive DNA modifications or special additives and would facilitate the widespread application of LAMP in facility-limited or point-of-care settings, paving the way to improvements in other isothermal-amplification-based techniques. MDPI 2023-03-10 /pmc/articles/PMC10046060/ /pubmed/36979579 http://dx.doi.org/10.3390/bios13030367 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Nam, Daehan
Kim, Seokjoon
Kim, Jung Ho
Lee, Seungjin
Kim, Daneub
Son, Jinseo
Kim, Doyeon
Cha, Byung Seok
Lee, Eun Sung
Park, Ki Soo
Low-Temperature Loop-Mediated Isothermal Amplification Operating at Physiological Temperature
title Low-Temperature Loop-Mediated Isothermal Amplification Operating at Physiological Temperature
title_full Low-Temperature Loop-Mediated Isothermal Amplification Operating at Physiological Temperature
title_fullStr Low-Temperature Loop-Mediated Isothermal Amplification Operating at Physiological Temperature
title_full_unstemmed Low-Temperature Loop-Mediated Isothermal Amplification Operating at Physiological Temperature
title_short Low-Temperature Loop-Mediated Isothermal Amplification Operating at Physiological Temperature
title_sort low-temperature loop-mediated isothermal amplification operating at physiological temperature
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10046060/
https://www.ncbi.nlm.nih.gov/pubmed/36979579
http://dx.doi.org/10.3390/bios13030367
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