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Evaluation of Genetic Testing in a Cohort of Diverse Pediatric Patients in the United States with Congenital Cataracts

The aim of this study was to evaluate the diagnostic yield from prior genetic testing in a 20-year cohort of pediatric patients with congenital cataracts. A retrospective review of patients with congenital cataracts who underwent genetic testing was completed from 2003–2022. The diagnostic yield of...

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Autores principales: Rossen, Jennifer L., Bohnsack, Brenda L., Zhang, Kevin X., Ing, Alexander, Drackley, Andy, Castelluccio, Valerie, Ralay-Ranaivo, Hanta
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10048176/
https://www.ncbi.nlm.nih.gov/pubmed/36980880
http://dx.doi.org/10.3390/genes14030608
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author Rossen, Jennifer L.
Bohnsack, Brenda L.
Zhang, Kevin X.
Ing, Alexander
Drackley, Andy
Castelluccio, Valerie
Ralay-Ranaivo, Hanta
author_facet Rossen, Jennifer L.
Bohnsack, Brenda L.
Zhang, Kevin X.
Ing, Alexander
Drackley, Andy
Castelluccio, Valerie
Ralay-Ranaivo, Hanta
author_sort Rossen, Jennifer L.
collection PubMed
description The aim of this study was to evaluate the diagnostic yield from prior genetic testing in a 20-year cohort of pediatric patients with congenital cataracts. A retrospective review of patients with congenital cataracts who underwent genetic testing was completed from 2003–2022. The diagnostic yield of the test was determined by variant classification and inheritance pattern. Variants from initial testing underwent reclassification in accordance with ACMG-AMP (American College of Medical Genetics and Genomics—American Association of Molecular Pathology) 2015 or 2020 ACMG CNV guidelines. A total of 95 variants were identified in 52 patients with congenital cataracts (42 bilateral, 10 unilateral); 42 % were White, 37% were Hispanic, 8% were Black, and 6% were Asian. The majority of patients (92%) did not have a family history of congenital cataracts but did have systemic illnesses (77%). Whole exome sequencing and targeted congenital cataract panels showed diagnostic yields of 46.2% and 37.5%, respectively. Microarray had the lowest yield at 11%. Compared to the initial classification, 16% (15 of 92 variants) had discrepant reclassifications. More testing is needed, and an increased focus is warranted in the field of ocular genetics on congenital cataracts, particularly in those with systemic illnesses and no family history, to advance our knowledge of this potentially blinding condition.
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spelling pubmed-100481762023-03-29 Evaluation of Genetic Testing in a Cohort of Diverse Pediatric Patients in the United States with Congenital Cataracts Rossen, Jennifer L. Bohnsack, Brenda L. Zhang, Kevin X. Ing, Alexander Drackley, Andy Castelluccio, Valerie Ralay-Ranaivo, Hanta Genes (Basel) Article The aim of this study was to evaluate the diagnostic yield from prior genetic testing in a 20-year cohort of pediatric patients with congenital cataracts. A retrospective review of patients with congenital cataracts who underwent genetic testing was completed from 2003–2022. The diagnostic yield of the test was determined by variant classification and inheritance pattern. Variants from initial testing underwent reclassification in accordance with ACMG-AMP (American College of Medical Genetics and Genomics—American Association of Molecular Pathology) 2015 or 2020 ACMG CNV guidelines. A total of 95 variants were identified in 52 patients with congenital cataracts (42 bilateral, 10 unilateral); 42 % were White, 37% were Hispanic, 8% were Black, and 6% were Asian. The majority of patients (92%) did not have a family history of congenital cataracts but did have systemic illnesses (77%). Whole exome sequencing and targeted congenital cataract panels showed diagnostic yields of 46.2% and 37.5%, respectively. Microarray had the lowest yield at 11%. Compared to the initial classification, 16% (15 of 92 variants) had discrepant reclassifications. More testing is needed, and an increased focus is warranted in the field of ocular genetics on congenital cataracts, particularly in those with systemic illnesses and no family history, to advance our knowledge of this potentially blinding condition. MDPI 2023-02-28 /pmc/articles/PMC10048176/ /pubmed/36980880 http://dx.doi.org/10.3390/genes14030608 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Rossen, Jennifer L.
Bohnsack, Brenda L.
Zhang, Kevin X.
Ing, Alexander
Drackley, Andy
Castelluccio, Valerie
Ralay-Ranaivo, Hanta
Evaluation of Genetic Testing in a Cohort of Diverse Pediatric Patients in the United States with Congenital Cataracts
title Evaluation of Genetic Testing in a Cohort of Diverse Pediatric Patients in the United States with Congenital Cataracts
title_full Evaluation of Genetic Testing in a Cohort of Diverse Pediatric Patients in the United States with Congenital Cataracts
title_fullStr Evaluation of Genetic Testing in a Cohort of Diverse Pediatric Patients in the United States with Congenital Cataracts
title_full_unstemmed Evaluation of Genetic Testing in a Cohort of Diverse Pediatric Patients in the United States with Congenital Cataracts
title_short Evaluation of Genetic Testing in a Cohort of Diverse Pediatric Patients in the United States with Congenital Cataracts
title_sort evaluation of genetic testing in a cohort of diverse pediatric patients in the united states with congenital cataracts
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10048176/
https://www.ncbi.nlm.nih.gov/pubmed/36980880
http://dx.doi.org/10.3390/genes14030608
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