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Exome-Wide Association Study of Competitive Performance in Elite Athletes

The aim of the study was to identify genetic variants associated with personal best scores in Turkish track and field athletes and to compare allelic frequencies between sprint/power and endurance athletes and controls using a whole-exome sequencing (WES) approach, followed by replication studies in...

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Autores principales: Bulgay, Celal, Kasakolu, Anıl, Kazan, Hasan Hüseyin, Mijaica, Raluca, Zorba, Erdal, Akman, Onur, Bayraktar, Isık, Ekmekci, Rıdvan, Koncagul, Seyrani, Ulucan, Korkut, Semenova, Ekaterina A., Larin, Andrey K., Kulemin, Nikolay A., Generozov, Edward V., Balint, Lorand, Badicu, Georgian, Ahmetov, Ildus I., Ergun, Mehmet Ali
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10048216/
https://www.ncbi.nlm.nih.gov/pubmed/36980932
http://dx.doi.org/10.3390/genes14030660
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author Bulgay, Celal
Kasakolu, Anıl
Kazan, Hasan Hüseyin
Mijaica, Raluca
Zorba, Erdal
Akman, Onur
Bayraktar, Isık
Ekmekci, Rıdvan
Koncagul, Seyrani
Ulucan, Korkut
Semenova, Ekaterina A.
Larin, Andrey K.
Kulemin, Nikolay A.
Generozov, Edward V.
Balint, Lorand
Badicu, Georgian
Ahmetov, Ildus I.
Ergun, Mehmet Ali
author_facet Bulgay, Celal
Kasakolu, Anıl
Kazan, Hasan Hüseyin
Mijaica, Raluca
Zorba, Erdal
Akman, Onur
Bayraktar, Isık
Ekmekci, Rıdvan
Koncagul, Seyrani
Ulucan, Korkut
Semenova, Ekaterina A.
Larin, Andrey K.
Kulemin, Nikolay A.
Generozov, Edward V.
Balint, Lorand
Badicu, Georgian
Ahmetov, Ildus I.
Ergun, Mehmet Ali
author_sort Bulgay, Celal
collection PubMed
description The aim of the study was to identify genetic variants associated with personal best scores in Turkish track and field athletes and to compare allelic frequencies between sprint/power and endurance athletes and controls using a whole-exome sequencing (WES) approach, followed by replication studies in independent cohorts. The discovery phase involved 60 elite Turkish athletes (31 sprint/power and 29 endurance) and 20 ethnically matched controls. The replication phase involved 1132 individuals (115 elite Russian sprinters, 373 elite Russian endurance athletes (of which 75 athletes were with VO(2max) measurements), 209 controls, 148 Russian and 287 Finnish individuals with muscle fiber composition and cross-sectional area (CSA) data). None of the single nucleotide polymorphisms (SNPs) reached an exome-wide significance level (p < 2.3 × 10(−7)) in genotype–phenotype and case–control studies of Turkish athletes. However, of the 53 nominally (p < 0.05) associated SNPs, four functional variants were replicated. The SIRT1 rs41299232 G allele was significantly over-represented in Turkish (p = 0.047) and Russian (p = 0.018) endurance athletes compared to sprint/power athletes and was associated with increased VO(2max) (p = 0.037) and a greater proportion of slow-twitch muscle fibers (p = 0.035). The NUP210 rs2280084 A allele was significantly over-represented in Turkish (p = 0.044) and Russian (p = 0.012) endurance athletes compared to sprint/power athletes. The TRPM2 rs1785440 G allele was significantly over-represented in Turkish endurance athletes compared to sprint/power athletes (p = 0.034) and was associated with increased VO(2max) (p = 0.008). The AGRN rs4074992 C allele was significantly over-represented in Turkish sprint/power athletes compared to endurance athletes (p = 0.037) and was associated with a greater CSA of fast-twitch muscle fibers (p = 0.024). In conclusion, we present the first WES study of athletes showing that this approach can be used to identify novel genetic markers associated with exercise- and sport-related phenotypes.
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spelling pubmed-100482162023-03-29 Exome-Wide Association Study of Competitive Performance in Elite Athletes Bulgay, Celal Kasakolu, Anıl Kazan, Hasan Hüseyin Mijaica, Raluca Zorba, Erdal Akman, Onur Bayraktar, Isık Ekmekci, Rıdvan Koncagul, Seyrani Ulucan, Korkut Semenova, Ekaterina A. Larin, Andrey K. Kulemin, Nikolay A. Generozov, Edward V. Balint, Lorand Badicu, Georgian Ahmetov, Ildus I. Ergun, Mehmet Ali Genes (Basel) Article The aim of the study was to identify genetic variants associated with personal best scores in Turkish track and field athletes and to compare allelic frequencies between sprint/power and endurance athletes and controls using a whole-exome sequencing (WES) approach, followed by replication studies in independent cohorts. The discovery phase involved 60 elite Turkish athletes (31 sprint/power and 29 endurance) and 20 ethnically matched controls. The replication phase involved 1132 individuals (115 elite Russian sprinters, 373 elite Russian endurance athletes (of which 75 athletes were with VO(2max) measurements), 209 controls, 148 Russian and 287 Finnish individuals with muscle fiber composition and cross-sectional area (CSA) data). None of the single nucleotide polymorphisms (SNPs) reached an exome-wide significance level (p < 2.3 × 10(−7)) in genotype–phenotype and case–control studies of Turkish athletes. However, of the 53 nominally (p < 0.05) associated SNPs, four functional variants were replicated. The SIRT1 rs41299232 G allele was significantly over-represented in Turkish (p = 0.047) and Russian (p = 0.018) endurance athletes compared to sprint/power athletes and was associated with increased VO(2max) (p = 0.037) and a greater proportion of slow-twitch muscle fibers (p = 0.035). The NUP210 rs2280084 A allele was significantly over-represented in Turkish (p = 0.044) and Russian (p = 0.012) endurance athletes compared to sprint/power athletes. The TRPM2 rs1785440 G allele was significantly over-represented in Turkish endurance athletes compared to sprint/power athletes (p = 0.034) and was associated with increased VO(2max) (p = 0.008). The AGRN rs4074992 C allele was significantly over-represented in Turkish sprint/power athletes compared to endurance athletes (p = 0.037) and was associated with a greater CSA of fast-twitch muscle fibers (p = 0.024). In conclusion, we present the first WES study of athletes showing that this approach can be used to identify novel genetic markers associated with exercise- and sport-related phenotypes. MDPI 2023-03-06 /pmc/articles/PMC10048216/ /pubmed/36980932 http://dx.doi.org/10.3390/genes14030660 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Bulgay, Celal
Kasakolu, Anıl
Kazan, Hasan Hüseyin
Mijaica, Raluca
Zorba, Erdal
Akman, Onur
Bayraktar, Isık
Ekmekci, Rıdvan
Koncagul, Seyrani
Ulucan, Korkut
Semenova, Ekaterina A.
Larin, Andrey K.
Kulemin, Nikolay A.
Generozov, Edward V.
Balint, Lorand
Badicu, Georgian
Ahmetov, Ildus I.
Ergun, Mehmet Ali
Exome-Wide Association Study of Competitive Performance in Elite Athletes
title Exome-Wide Association Study of Competitive Performance in Elite Athletes
title_full Exome-Wide Association Study of Competitive Performance in Elite Athletes
title_fullStr Exome-Wide Association Study of Competitive Performance in Elite Athletes
title_full_unstemmed Exome-Wide Association Study of Competitive Performance in Elite Athletes
title_short Exome-Wide Association Study of Competitive Performance in Elite Athletes
title_sort exome-wide association study of competitive performance in elite athletes
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10048216/
https://www.ncbi.nlm.nih.gov/pubmed/36980932
http://dx.doi.org/10.3390/genes14030660
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