Cargando…
Exome-Wide Association Study of Competitive Performance in Elite Athletes
The aim of the study was to identify genetic variants associated with personal best scores in Turkish track and field athletes and to compare allelic frequencies between sprint/power and endurance athletes and controls using a whole-exome sequencing (WES) approach, followed by replication studies in...
Autores principales: | , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10048216/ https://www.ncbi.nlm.nih.gov/pubmed/36980932 http://dx.doi.org/10.3390/genes14030660 |
_version_ | 1785014128246521856 |
---|---|
author | Bulgay, Celal Kasakolu, Anıl Kazan, Hasan Hüseyin Mijaica, Raluca Zorba, Erdal Akman, Onur Bayraktar, Isık Ekmekci, Rıdvan Koncagul, Seyrani Ulucan, Korkut Semenova, Ekaterina A. Larin, Andrey K. Kulemin, Nikolay A. Generozov, Edward V. Balint, Lorand Badicu, Georgian Ahmetov, Ildus I. Ergun, Mehmet Ali |
author_facet | Bulgay, Celal Kasakolu, Anıl Kazan, Hasan Hüseyin Mijaica, Raluca Zorba, Erdal Akman, Onur Bayraktar, Isık Ekmekci, Rıdvan Koncagul, Seyrani Ulucan, Korkut Semenova, Ekaterina A. Larin, Andrey K. Kulemin, Nikolay A. Generozov, Edward V. Balint, Lorand Badicu, Georgian Ahmetov, Ildus I. Ergun, Mehmet Ali |
author_sort | Bulgay, Celal |
collection | PubMed |
description | The aim of the study was to identify genetic variants associated with personal best scores in Turkish track and field athletes and to compare allelic frequencies between sprint/power and endurance athletes and controls using a whole-exome sequencing (WES) approach, followed by replication studies in independent cohorts. The discovery phase involved 60 elite Turkish athletes (31 sprint/power and 29 endurance) and 20 ethnically matched controls. The replication phase involved 1132 individuals (115 elite Russian sprinters, 373 elite Russian endurance athletes (of which 75 athletes were with VO(2max) measurements), 209 controls, 148 Russian and 287 Finnish individuals with muscle fiber composition and cross-sectional area (CSA) data). None of the single nucleotide polymorphisms (SNPs) reached an exome-wide significance level (p < 2.3 × 10(−7)) in genotype–phenotype and case–control studies of Turkish athletes. However, of the 53 nominally (p < 0.05) associated SNPs, four functional variants were replicated. The SIRT1 rs41299232 G allele was significantly over-represented in Turkish (p = 0.047) and Russian (p = 0.018) endurance athletes compared to sprint/power athletes and was associated with increased VO(2max) (p = 0.037) and a greater proportion of slow-twitch muscle fibers (p = 0.035). The NUP210 rs2280084 A allele was significantly over-represented in Turkish (p = 0.044) and Russian (p = 0.012) endurance athletes compared to sprint/power athletes. The TRPM2 rs1785440 G allele was significantly over-represented in Turkish endurance athletes compared to sprint/power athletes (p = 0.034) and was associated with increased VO(2max) (p = 0.008). The AGRN rs4074992 C allele was significantly over-represented in Turkish sprint/power athletes compared to endurance athletes (p = 0.037) and was associated with a greater CSA of fast-twitch muscle fibers (p = 0.024). In conclusion, we present the first WES study of athletes showing that this approach can be used to identify novel genetic markers associated with exercise- and sport-related phenotypes. |
format | Online Article Text |
id | pubmed-10048216 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-100482162023-03-29 Exome-Wide Association Study of Competitive Performance in Elite Athletes Bulgay, Celal Kasakolu, Anıl Kazan, Hasan Hüseyin Mijaica, Raluca Zorba, Erdal Akman, Onur Bayraktar, Isık Ekmekci, Rıdvan Koncagul, Seyrani Ulucan, Korkut Semenova, Ekaterina A. Larin, Andrey K. Kulemin, Nikolay A. Generozov, Edward V. Balint, Lorand Badicu, Georgian Ahmetov, Ildus I. Ergun, Mehmet Ali Genes (Basel) Article The aim of the study was to identify genetic variants associated with personal best scores in Turkish track and field athletes and to compare allelic frequencies between sprint/power and endurance athletes and controls using a whole-exome sequencing (WES) approach, followed by replication studies in independent cohorts. The discovery phase involved 60 elite Turkish athletes (31 sprint/power and 29 endurance) and 20 ethnically matched controls. The replication phase involved 1132 individuals (115 elite Russian sprinters, 373 elite Russian endurance athletes (of which 75 athletes were with VO(2max) measurements), 209 controls, 148 Russian and 287 Finnish individuals with muscle fiber composition and cross-sectional area (CSA) data). None of the single nucleotide polymorphisms (SNPs) reached an exome-wide significance level (p < 2.3 × 10(−7)) in genotype–phenotype and case–control studies of Turkish athletes. However, of the 53 nominally (p < 0.05) associated SNPs, four functional variants were replicated. The SIRT1 rs41299232 G allele was significantly over-represented in Turkish (p = 0.047) and Russian (p = 0.018) endurance athletes compared to sprint/power athletes and was associated with increased VO(2max) (p = 0.037) and a greater proportion of slow-twitch muscle fibers (p = 0.035). The NUP210 rs2280084 A allele was significantly over-represented in Turkish (p = 0.044) and Russian (p = 0.012) endurance athletes compared to sprint/power athletes. The TRPM2 rs1785440 G allele was significantly over-represented in Turkish endurance athletes compared to sprint/power athletes (p = 0.034) and was associated with increased VO(2max) (p = 0.008). The AGRN rs4074992 C allele was significantly over-represented in Turkish sprint/power athletes compared to endurance athletes (p = 0.037) and was associated with a greater CSA of fast-twitch muscle fibers (p = 0.024). In conclusion, we present the first WES study of athletes showing that this approach can be used to identify novel genetic markers associated with exercise- and sport-related phenotypes. MDPI 2023-03-06 /pmc/articles/PMC10048216/ /pubmed/36980932 http://dx.doi.org/10.3390/genes14030660 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Bulgay, Celal Kasakolu, Anıl Kazan, Hasan Hüseyin Mijaica, Raluca Zorba, Erdal Akman, Onur Bayraktar, Isık Ekmekci, Rıdvan Koncagul, Seyrani Ulucan, Korkut Semenova, Ekaterina A. Larin, Andrey K. Kulemin, Nikolay A. Generozov, Edward V. Balint, Lorand Badicu, Georgian Ahmetov, Ildus I. Ergun, Mehmet Ali Exome-Wide Association Study of Competitive Performance in Elite Athletes |
title | Exome-Wide Association Study of Competitive Performance in Elite Athletes |
title_full | Exome-Wide Association Study of Competitive Performance in Elite Athletes |
title_fullStr | Exome-Wide Association Study of Competitive Performance in Elite Athletes |
title_full_unstemmed | Exome-Wide Association Study of Competitive Performance in Elite Athletes |
title_short | Exome-Wide Association Study of Competitive Performance in Elite Athletes |
title_sort | exome-wide association study of competitive performance in elite athletes |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10048216/ https://www.ncbi.nlm.nih.gov/pubmed/36980932 http://dx.doi.org/10.3390/genes14030660 |
work_keys_str_mv | AT bulgaycelal exomewideassociationstudyofcompetitiveperformanceineliteathletes AT kasakoluanıl exomewideassociationstudyofcompetitiveperformanceineliteathletes AT kazanhasanhuseyin exomewideassociationstudyofcompetitiveperformanceineliteathletes AT mijaicaraluca exomewideassociationstudyofcompetitiveperformanceineliteathletes AT zorbaerdal exomewideassociationstudyofcompetitiveperformanceineliteathletes AT akmanonur exomewideassociationstudyofcompetitiveperformanceineliteathletes AT bayraktarisık exomewideassociationstudyofcompetitiveperformanceineliteathletes AT ekmekcirıdvan exomewideassociationstudyofcompetitiveperformanceineliteathletes AT koncagulseyrani exomewideassociationstudyofcompetitiveperformanceineliteathletes AT ulucankorkut exomewideassociationstudyofcompetitiveperformanceineliteathletes AT semenovaekaterinaa exomewideassociationstudyofcompetitiveperformanceineliteathletes AT larinandreyk exomewideassociationstudyofcompetitiveperformanceineliteathletes AT kuleminnikolaya exomewideassociationstudyofcompetitiveperformanceineliteathletes AT generozovedwardv exomewideassociationstudyofcompetitiveperformanceineliteathletes AT balintlorand exomewideassociationstudyofcompetitiveperformanceineliteathletes AT badicugeorgian exomewideassociationstudyofcompetitiveperformanceineliteathletes AT ahmetovildusi exomewideassociationstudyofcompetitiveperformanceineliteathletes AT ergunmehmetali exomewideassociationstudyofcompetitiveperformanceineliteathletes |