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Accumulation of STR-Loci Aberrations in Subclones of Jurkat Cell Line as a Model of Tumor Clonal Evolution

Many genetic markers are known to distinguish tumor cells from normal. Genetic lesions found at disease onset often belong to a predominant tumor clone, and further observation makes it possible to assess the fate of this clone during therapy. However, minor clones escape monitoring and become unide...

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Autores principales: Risinskaya, Natalya, Glinshchikova, Olga, Makarik, Tatiana, Kozhevnikova, Yana, Chabaeva, Julia, Kulikov, Sergey
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10048572/
https://www.ncbi.nlm.nih.gov/pubmed/36980843
http://dx.doi.org/10.3390/genes14030571
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author Risinskaya, Natalya
Glinshchikova, Olga
Makarik, Tatiana
Kozhevnikova, Yana
Chabaeva, Julia
Kulikov, Sergey
author_facet Risinskaya, Natalya
Glinshchikova, Olga
Makarik, Tatiana
Kozhevnikova, Yana
Chabaeva, Julia
Kulikov, Sergey
author_sort Risinskaya, Natalya
collection PubMed
description Many genetic markers are known to distinguish tumor cells from normal. Genetic lesions found at disease onset often belong to a predominant tumor clone, and further observation makes it possible to assess the fate of this clone during therapy. However, minor clones escape monitoring and become unidentified, leading to relapses. Here we report the results of in vitro study of clonal evolution in cultured tumor cell line (Jurkat) compared to the cell line of non-tumor origin (WIL2-S). Cell lines were cultured and cloned by limiting dilutions. Subclones were tested by short tandem repeats (STR) profiling. Spontaneous STR aberrations in cells of non-tumor origin occur in less than 1 of 100 cultured cells. While in the cells of tumor origin, new aberrations appear in 1 or even more of 3 cultured cells. At the same time, a significant relationship was found between the accumulation of aberrations in the pool of subclones and the rate of cell growth. One can speculate that this approach could be applied for the analysis of primary patient tumor cell culture to obtain information concerning the evolutionary potential of the tumor cells that may be useful for the selection of a therapy approach.
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spelling pubmed-100485722023-03-29 Accumulation of STR-Loci Aberrations in Subclones of Jurkat Cell Line as a Model of Tumor Clonal Evolution Risinskaya, Natalya Glinshchikova, Olga Makarik, Tatiana Kozhevnikova, Yana Chabaeva, Julia Kulikov, Sergey Genes (Basel) Article Many genetic markers are known to distinguish tumor cells from normal. Genetic lesions found at disease onset often belong to a predominant tumor clone, and further observation makes it possible to assess the fate of this clone during therapy. However, minor clones escape monitoring and become unidentified, leading to relapses. Here we report the results of in vitro study of clonal evolution in cultured tumor cell line (Jurkat) compared to the cell line of non-tumor origin (WIL2-S). Cell lines were cultured and cloned by limiting dilutions. Subclones were tested by short tandem repeats (STR) profiling. Spontaneous STR aberrations in cells of non-tumor origin occur in less than 1 of 100 cultured cells. While in the cells of tumor origin, new aberrations appear in 1 or even more of 3 cultured cells. At the same time, a significant relationship was found between the accumulation of aberrations in the pool of subclones and the rate of cell growth. One can speculate that this approach could be applied for the analysis of primary patient tumor cell culture to obtain information concerning the evolutionary potential of the tumor cells that may be useful for the selection of a therapy approach. MDPI 2023-02-24 /pmc/articles/PMC10048572/ /pubmed/36980843 http://dx.doi.org/10.3390/genes14030571 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Risinskaya, Natalya
Glinshchikova, Olga
Makarik, Tatiana
Kozhevnikova, Yana
Chabaeva, Julia
Kulikov, Sergey
Accumulation of STR-Loci Aberrations in Subclones of Jurkat Cell Line as a Model of Tumor Clonal Evolution
title Accumulation of STR-Loci Aberrations in Subclones of Jurkat Cell Line as a Model of Tumor Clonal Evolution
title_full Accumulation of STR-Loci Aberrations in Subclones of Jurkat Cell Line as a Model of Tumor Clonal Evolution
title_fullStr Accumulation of STR-Loci Aberrations in Subclones of Jurkat Cell Line as a Model of Tumor Clonal Evolution
title_full_unstemmed Accumulation of STR-Loci Aberrations in Subclones of Jurkat Cell Line as a Model of Tumor Clonal Evolution
title_short Accumulation of STR-Loci Aberrations in Subclones of Jurkat Cell Line as a Model of Tumor Clonal Evolution
title_sort accumulation of str-loci aberrations in subclones of jurkat cell line as a model of tumor clonal evolution
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10048572/
https://www.ncbi.nlm.nih.gov/pubmed/36980843
http://dx.doi.org/10.3390/genes14030571
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