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Arabidopsis TRB proteins function in H3K4me3 demethylation by recruiting JMJ14

Arabidopsis telomeric repeat binding factors (TRBs) can bind telomeric DNA sequences to protect telomeres from degradation. TRBs can also recruit Polycomb Repressive Complex 2 (PRC2) to deposit tri-methylation of H3 lysine 27 (H3K27me3) over certain target loci. Here, we demonstrate that TRBs also a...

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Autores principales: Wang, Ming, Zhong, Zhenhui, Gallego-Bartolomé, Javier, Feng, Suhua, Shih, Yuan-Hsin, Liu, Mukun, Zhou, Jessica, Richey, John Curtis, Ng, Charmaine, Jami-Alahmadi, Yasaman, Wohlschlegel, James, Wu, Keqiang, Jacobsen, Steven E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10049986/
https://www.ncbi.nlm.nih.gov/pubmed/36977663
http://dx.doi.org/10.1038/s41467-023-37263-9
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author Wang, Ming
Zhong, Zhenhui
Gallego-Bartolomé, Javier
Feng, Suhua
Shih, Yuan-Hsin
Liu, Mukun
Zhou, Jessica
Richey, John Curtis
Ng, Charmaine
Jami-Alahmadi, Yasaman
Wohlschlegel, James
Wu, Keqiang
Jacobsen, Steven E.
author_facet Wang, Ming
Zhong, Zhenhui
Gallego-Bartolomé, Javier
Feng, Suhua
Shih, Yuan-Hsin
Liu, Mukun
Zhou, Jessica
Richey, John Curtis
Ng, Charmaine
Jami-Alahmadi, Yasaman
Wohlschlegel, James
Wu, Keqiang
Jacobsen, Steven E.
author_sort Wang, Ming
collection PubMed
description Arabidopsis telomeric repeat binding factors (TRBs) can bind telomeric DNA sequences to protect telomeres from degradation. TRBs can also recruit Polycomb Repressive Complex 2 (PRC2) to deposit tri-methylation of H3 lysine 27 (H3K27me3) over certain target loci. Here, we demonstrate that TRBs also associate and colocalize with JUMONJI14 (JMJ14) and trigger H3K4me3 demethylation at some loci. The trb1/2/3 triple mutant and the jmj14-1 mutant show an increased level of H3K4me3 over TRB and JMJ14 binding sites, resulting in up-regulation of their target genes. Furthermore, tethering TRBs to the promoter region of genes with an artificial zinc finger (TRB-ZF) successfully triggers target gene silencing, as well as H3K27me3 deposition, and H3K4me3 removal. Interestingly, JMJ14 is predominantly recruited to ZF off-target sites with low levels of H3K4me3, which is accompanied with TRB-ZFs triggered H3K4me3 removal at these loci. These results suggest that TRB proteins coordinate PRC2 and JMJ14 activities to repress target genes via H3K27me3 deposition and H3K4me3 removal.
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spelling pubmed-100499862023-03-30 Arabidopsis TRB proteins function in H3K4me3 demethylation by recruiting JMJ14 Wang, Ming Zhong, Zhenhui Gallego-Bartolomé, Javier Feng, Suhua Shih, Yuan-Hsin Liu, Mukun Zhou, Jessica Richey, John Curtis Ng, Charmaine Jami-Alahmadi, Yasaman Wohlschlegel, James Wu, Keqiang Jacobsen, Steven E. Nat Commun Article Arabidopsis telomeric repeat binding factors (TRBs) can bind telomeric DNA sequences to protect telomeres from degradation. TRBs can also recruit Polycomb Repressive Complex 2 (PRC2) to deposit tri-methylation of H3 lysine 27 (H3K27me3) over certain target loci. Here, we demonstrate that TRBs also associate and colocalize with JUMONJI14 (JMJ14) and trigger H3K4me3 demethylation at some loci. The trb1/2/3 triple mutant and the jmj14-1 mutant show an increased level of H3K4me3 over TRB and JMJ14 binding sites, resulting in up-regulation of their target genes. Furthermore, tethering TRBs to the promoter region of genes with an artificial zinc finger (TRB-ZF) successfully triggers target gene silencing, as well as H3K27me3 deposition, and H3K4me3 removal. Interestingly, JMJ14 is predominantly recruited to ZF off-target sites with low levels of H3K4me3, which is accompanied with TRB-ZFs triggered H3K4me3 removal at these loci. These results suggest that TRB proteins coordinate PRC2 and JMJ14 activities to repress target genes via H3K27me3 deposition and H3K4me3 removal. Nature Publishing Group UK 2023-03-28 /pmc/articles/PMC10049986/ /pubmed/36977663 http://dx.doi.org/10.1038/s41467-023-37263-9 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Wang, Ming
Zhong, Zhenhui
Gallego-Bartolomé, Javier
Feng, Suhua
Shih, Yuan-Hsin
Liu, Mukun
Zhou, Jessica
Richey, John Curtis
Ng, Charmaine
Jami-Alahmadi, Yasaman
Wohlschlegel, James
Wu, Keqiang
Jacobsen, Steven E.
Arabidopsis TRB proteins function in H3K4me3 demethylation by recruiting JMJ14
title Arabidopsis TRB proteins function in H3K4me3 demethylation by recruiting JMJ14
title_full Arabidopsis TRB proteins function in H3K4me3 demethylation by recruiting JMJ14
title_fullStr Arabidopsis TRB proteins function in H3K4me3 demethylation by recruiting JMJ14
title_full_unstemmed Arabidopsis TRB proteins function in H3K4me3 demethylation by recruiting JMJ14
title_short Arabidopsis TRB proteins function in H3K4me3 demethylation by recruiting JMJ14
title_sort arabidopsis trb proteins function in h3k4me3 demethylation by recruiting jmj14
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10049986/
https://www.ncbi.nlm.nih.gov/pubmed/36977663
http://dx.doi.org/10.1038/s41467-023-37263-9
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