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SMASH: Scalable Method for Analyzing Spatial Heterogeneity of genes in spatial transcriptomics data

In high-throughput spatial transcriptomics (ST) studies, it is of great interest to identify the genes whose level of expression in a tissue covaries with the spatial location of cells/spots. Such genes, also known as spatially variable genes (SVGs), can be crucial to the biological understanding of...

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Detalles Bibliográficos
Autores principales: Seal, Souvik, Bitler, Benjamin G., Ghosh, Debashis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10055313/
https://www.ncbi.nlm.nih.gov/pubmed/36993287
http://dx.doi.org/10.1101/2023.03.23.533980