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Raman spectroscopy combined with a support vector machine algorithm as a diagnostic technique for primary Sjögren’s syndrome

The aim of this study was to explore the feasibility of Raman spectroscopy combined with computer algorithms in the diagnosis of primary Sjögren syndrome (pSS). In this study, Raman spectra of 60 serum samples were acquired from 30 patients with pSS and 30 healthy controls (HCs). The means and stand...

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Autores principales: Chen, Xiaomei, Wu, Xue, Chen, Chen, Luo, Cainan, Shi, Yamei, Li, Zhengfang, Lv, Xiaoyi, Chen, Cheng, Su, Jinmei, Wu, Lijun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10060214/
https://www.ncbi.nlm.nih.gov/pubmed/36991016
http://dx.doi.org/10.1038/s41598-023-29943-9
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author Chen, Xiaomei
Wu, Xue
Chen, Chen
Luo, Cainan
Shi, Yamei
Li, Zhengfang
Lv, Xiaoyi
Chen, Cheng
Su, Jinmei
Wu, Lijun
author_facet Chen, Xiaomei
Wu, Xue
Chen, Chen
Luo, Cainan
Shi, Yamei
Li, Zhengfang
Lv, Xiaoyi
Chen, Cheng
Su, Jinmei
Wu, Lijun
author_sort Chen, Xiaomei
collection PubMed
description The aim of this study was to explore the feasibility of Raman spectroscopy combined with computer algorithms in the diagnosis of primary Sjögren syndrome (pSS). In this study, Raman spectra of 60 serum samples were acquired from 30 patients with pSS and 30 healthy controls (HCs). The means and standard deviations of the raw spectra of patients with pSS and HCs were calculated. Spectral features were assigned based on the literature. Principal component analysis (PCA) was used to extract the spectral features. Then, a particle swarm optimization (PSO)-support vector machine (SVM) was selected as the method of parameter optimization to rapidly classify patients with pSS and HCs. In this study, the SVM algorithm was used as the classification model, and the radial basis kernel function was selected as the kernel function. In addition, the PSO algorithm was used to establish a model for the parameter optimization method. The training set and test set were randomly divided at a ratio of 7:3. After PCA dimension reduction, the specificity, sensitivity and accuracy of the PSO-SVM model were obtained, and the results were 88.89%, 100% and 94.44%, respectively. This study showed that the combination of Raman spectroscopy and a support vector machine algorithm could be used as an effective pSS diagnosis method with broad application value.
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spelling pubmed-100602142023-03-31 Raman spectroscopy combined with a support vector machine algorithm as a diagnostic technique for primary Sjögren’s syndrome Chen, Xiaomei Wu, Xue Chen, Chen Luo, Cainan Shi, Yamei Li, Zhengfang Lv, Xiaoyi Chen, Cheng Su, Jinmei Wu, Lijun Sci Rep Article The aim of this study was to explore the feasibility of Raman spectroscopy combined with computer algorithms in the diagnosis of primary Sjögren syndrome (pSS). In this study, Raman spectra of 60 serum samples were acquired from 30 patients with pSS and 30 healthy controls (HCs). The means and standard deviations of the raw spectra of patients with pSS and HCs were calculated. Spectral features were assigned based on the literature. Principal component analysis (PCA) was used to extract the spectral features. Then, a particle swarm optimization (PSO)-support vector machine (SVM) was selected as the method of parameter optimization to rapidly classify patients with pSS and HCs. In this study, the SVM algorithm was used as the classification model, and the radial basis kernel function was selected as the kernel function. In addition, the PSO algorithm was used to establish a model for the parameter optimization method. The training set and test set were randomly divided at a ratio of 7:3. After PCA dimension reduction, the specificity, sensitivity and accuracy of the PSO-SVM model were obtained, and the results were 88.89%, 100% and 94.44%, respectively. This study showed that the combination of Raman spectroscopy and a support vector machine algorithm could be used as an effective pSS diagnosis method with broad application value. Nature Publishing Group UK 2023-03-29 /pmc/articles/PMC10060214/ /pubmed/36991016 http://dx.doi.org/10.1038/s41598-023-29943-9 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Chen, Xiaomei
Wu, Xue
Chen, Chen
Luo, Cainan
Shi, Yamei
Li, Zhengfang
Lv, Xiaoyi
Chen, Cheng
Su, Jinmei
Wu, Lijun
Raman spectroscopy combined with a support vector machine algorithm as a diagnostic technique for primary Sjögren’s syndrome
title Raman spectroscopy combined with a support vector machine algorithm as a diagnostic technique for primary Sjögren’s syndrome
title_full Raman spectroscopy combined with a support vector machine algorithm as a diagnostic technique for primary Sjögren’s syndrome
title_fullStr Raman spectroscopy combined with a support vector machine algorithm as a diagnostic technique for primary Sjögren’s syndrome
title_full_unstemmed Raman spectroscopy combined with a support vector machine algorithm as a diagnostic technique for primary Sjögren’s syndrome
title_short Raman spectroscopy combined with a support vector machine algorithm as a diagnostic technique for primary Sjögren’s syndrome
title_sort raman spectroscopy combined with a support vector machine algorithm as a diagnostic technique for primary sjögren’s syndrome
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10060214/
https://www.ncbi.nlm.nih.gov/pubmed/36991016
http://dx.doi.org/10.1038/s41598-023-29943-9
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