Cargando…
Identification by whole genome sequencing of genes associated with delayed postoperative hemorrhage in Scottish deerhounds
BACKGROUND: Delayed postoperative hemorrhage (DEPOH) is an important health concern for Scottish deerhounds. HYPOTHESIS/OBJECTIVES: Identify genes associated with DEPOH in Scottish deerhounds. ANIMALS: Two hundred sixty‐nine privately owned Scottish deerhounds. METHODS: Retrospective case‐control st...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley & Sons, Inc.
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10061167/ https://www.ncbi.nlm.nih.gov/pubmed/36780177 http://dx.doi.org/10.1111/jvim.16643 |
_version_ | 1785017240749342720 |
---|---|
author | Court, Michael H. Kiser, Jennifer N. Neibergs, Holly L. Zhu, Zhaohui Dillberger, John E. |
author_facet | Court, Michael H. Kiser, Jennifer N. Neibergs, Holly L. Zhu, Zhaohui Dillberger, John E. |
author_sort | Court, Michael H. |
collection | PubMed |
description | BACKGROUND: Delayed postoperative hemorrhage (DEPOH) is an important health concern for Scottish deerhounds. HYPOTHESIS/OBJECTIVES: Identify genes associated with DEPOH in Scottish deerhounds. ANIMALS: Two hundred sixty‐nine privately owned Scottish deerhounds. METHODS: Retrospective case‐control study. DEPOH cases and controls were identified through an owner health survey. Genome‐wide association analysis was performed using whole genome sequences from 8 cases and 17 controls. All cases and controls were genotyped for selected variants. RESULTS: Of 269 dogs, 10 met inclusion and exclusion criteria for DEPOH, while 62 controls had undergone similar surgical procedures without DEPOH. Genome‐wide association analysis identified a single locus on chromosome 9 spanning 40 genes. One of these genes (SERPINF2 encoding alpha‐2 antiplasmin) was directly linked to the pathophysiology of DEPOH. The entire cohort was genotyped for a missense SERPINF2 variant (c.605 C>T; p.A202V). Compared to dogs with the reference C/C genotype, the likelihood of DEPOH was significantly higher for dogs with the T/T genotype (odds ratio [OR] = 1235; 95% confidence interval [CI] = 23‐6752; P = 0.0005) and with the C/T genotype (OR = 28; 95% CI = 1.4‐542; P = 0.03). CONCLUSIONS AND CLINICAL IMPORTANCE: SERPINF2 is associated with DEPOH in Scottish deerhounds. Genetic testing might be able to identify dogs that are susceptible to DEPOH. |
format | Online Article Text |
id | pubmed-10061167 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | John Wiley & Sons, Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-100611672023-03-31 Identification by whole genome sequencing of genes associated with delayed postoperative hemorrhage in Scottish deerhounds Court, Michael H. Kiser, Jennifer N. Neibergs, Holly L. Zhu, Zhaohui Dillberger, John E. J Vet Intern Med SMALL ANIMAL BACKGROUND: Delayed postoperative hemorrhage (DEPOH) is an important health concern for Scottish deerhounds. HYPOTHESIS/OBJECTIVES: Identify genes associated with DEPOH in Scottish deerhounds. ANIMALS: Two hundred sixty‐nine privately owned Scottish deerhounds. METHODS: Retrospective case‐control study. DEPOH cases and controls were identified through an owner health survey. Genome‐wide association analysis was performed using whole genome sequences from 8 cases and 17 controls. All cases and controls were genotyped for selected variants. RESULTS: Of 269 dogs, 10 met inclusion and exclusion criteria for DEPOH, while 62 controls had undergone similar surgical procedures without DEPOH. Genome‐wide association analysis identified a single locus on chromosome 9 spanning 40 genes. One of these genes (SERPINF2 encoding alpha‐2 antiplasmin) was directly linked to the pathophysiology of DEPOH. The entire cohort was genotyped for a missense SERPINF2 variant (c.605 C>T; p.A202V). Compared to dogs with the reference C/C genotype, the likelihood of DEPOH was significantly higher for dogs with the T/T genotype (odds ratio [OR] = 1235; 95% confidence interval [CI] = 23‐6752; P = 0.0005) and with the C/T genotype (OR = 28; 95% CI = 1.4‐542; P = 0.03). CONCLUSIONS AND CLINICAL IMPORTANCE: SERPINF2 is associated with DEPOH in Scottish deerhounds. Genetic testing might be able to identify dogs that are susceptible to DEPOH. John Wiley & Sons, Inc. 2023-02-13 /pmc/articles/PMC10061167/ /pubmed/36780177 http://dx.doi.org/10.1111/jvim.16643 Text en © 2023 The Authors. Journal of Veterinary Internal Medicine published by Wiley Periodicals LLC on behalf of American College of Veterinary Internal Medicine. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | SMALL ANIMAL Court, Michael H. Kiser, Jennifer N. Neibergs, Holly L. Zhu, Zhaohui Dillberger, John E. Identification by whole genome sequencing of genes associated with delayed postoperative hemorrhage in Scottish deerhounds |
title | Identification by whole genome sequencing of genes associated with delayed postoperative hemorrhage in Scottish deerhounds |
title_full | Identification by whole genome sequencing of genes associated with delayed postoperative hemorrhage in Scottish deerhounds |
title_fullStr | Identification by whole genome sequencing of genes associated with delayed postoperative hemorrhage in Scottish deerhounds |
title_full_unstemmed | Identification by whole genome sequencing of genes associated with delayed postoperative hemorrhage in Scottish deerhounds |
title_short | Identification by whole genome sequencing of genes associated with delayed postoperative hemorrhage in Scottish deerhounds |
title_sort | identification by whole genome sequencing of genes associated with delayed postoperative hemorrhage in scottish deerhounds |
topic | SMALL ANIMAL |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10061167/ https://www.ncbi.nlm.nih.gov/pubmed/36780177 http://dx.doi.org/10.1111/jvim.16643 |
work_keys_str_mv | AT courtmichaelh identificationbywholegenomesequencingofgenesassociatedwithdelayedpostoperativehemorrhageinscottishdeerhounds AT kiserjennifern identificationbywholegenomesequencingofgenesassociatedwithdelayedpostoperativehemorrhageinscottishdeerhounds AT neibergshollyl identificationbywholegenomesequencingofgenesassociatedwithdelayedpostoperativehemorrhageinscottishdeerhounds AT zhuzhaohui identificationbywholegenomesequencingofgenesassociatedwithdelayedpostoperativehemorrhageinscottishdeerhounds AT dillbergerjohne identificationbywholegenomesequencingofgenesassociatedwithdelayedpostoperativehemorrhageinscottishdeerhounds |