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ITGB1-mediated molecular landscape and cuproptosis phenotype induced the worse prognosis in diffuse gastric cancer

Diffuse type gastric cancer was identified with relatively worse prognosis than other Lauren’s histological classification. Integrin β1 (ITGB1) was a member of integrin family which played a markedly important role in tumorigenesis and progression. However, the influence of ITGB1 in diffuse gastric...

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Autores principales: Zhu, Xingyu, Chen, Hao, Li, Han, Ren, Huicheng, Ye, Chunshui, Xu, Kang, Liu, Jin, Du, Fengying, Zhang, Zihao, Liu, Yuan, Xie, Xiaozhou, Wang, Mingfei, Ma, Tianrong, Chong, Wei, Shang, Liang, Li, Leping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10063208/
https://www.ncbi.nlm.nih.gov/pubmed/37007126
http://dx.doi.org/10.3389/fonc.2023.1115510
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author Zhu, Xingyu
Chen, Hao
Li, Han
Ren, Huicheng
Ye, Chunshui
Xu, Kang
Liu, Jin
Du, Fengying
Zhang, Zihao
Liu, Yuan
Xie, Xiaozhou
Wang, Mingfei
Ma, Tianrong
Chong, Wei
Shang, Liang
Li, Leping
author_facet Zhu, Xingyu
Chen, Hao
Li, Han
Ren, Huicheng
Ye, Chunshui
Xu, Kang
Liu, Jin
Du, Fengying
Zhang, Zihao
Liu, Yuan
Xie, Xiaozhou
Wang, Mingfei
Ma, Tianrong
Chong, Wei
Shang, Liang
Li, Leping
author_sort Zhu, Xingyu
collection PubMed
description Diffuse type gastric cancer was identified with relatively worse prognosis than other Lauren’s histological classification. Integrin β1 (ITGB1) was a member of integrin family which played a markedly important role in tumorigenesis and progression. However, the influence of ITGB1 in diffuse gastric cancer (DGC) remains uncertain. Here, we leveraged the transcriptomic and proteomic data to explore the association between ITGB1 expression and clinicopathologic information and biological process in DGC. Cell phenotype experiments combined with quantitative-PCR (q-PCR) and western blotting were utilized to identify the potential molecular mechanism underling ITGB1.Transcriptomics and proteomics both revealed that the higher ITGB1 expression was significantly associated with worse prognosis in DGC, but not in intestinal GC. Genomic analysis indicated that the mutation frequency of significantly mutated genes of ARID1A and COL11A1, and mutational signatures of SBS6 and SBS15 were markedly increased in the ITGB1 low expression subgroup. The enrichment analysis revealed diverse pathways related to dysregulation of ITGB1 in DGC, especially in cell adhesion, proliferation, metabolism reprogramming, and immune regulation alterations. Elevated activities of kinase-ROCK1, PKACA/PRKACA and AKT1 were observed in the ITGB1 high-expression subgroup. The ssGSEA analysis also found that ITGB1 low-expression had a higher cuproptosis score and was negatively correlated with key regulators of cuproptosis, including FDX1, DLAT, and DLST. We further observed that the upregulated expression of mitochondrial tricarboxylic acid (TCA) cycle in the ITGB1 low-expression group. Reduced expression of ITGB1 inhibited the ability of cell proliferation and motility and also potentiated the cell sensitive to copper ionophores via western blotting assay. Overall, this study revealed that ITGB1 was a protumorigenic gene and regulated tumor metabolism and cuproptosis in DGC.
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spelling pubmed-100632082023-03-31 ITGB1-mediated molecular landscape and cuproptosis phenotype induced the worse prognosis in diffuse gastric cancer Zhu, Xingyu Chen, Hao Li, Han Ren, Huicheng Ye, Chunshui Xu, Kang Liu, Jin Du, Fengying Zhang, Zihao Liu, Yuan Xie, Xiaozhou Wang, Mingfei Ma, Tianrong Chong, Wei Shang, Liang Li, Leping Front Oncol Oncology Diffuse type gastric cancer was identified with relatively worse prognosis than other Lauren’s histological classification. Integrin β1 (ITGB1) was a member of integrin family which played a markedly important role in tumorigenesis and progression. However, the influence of ITGB1 in diffuse gastric cancer (DGC) remains uncertain. Here, we leveraged the transcriptomic and proteomic data to explore the association between ITGB1 expression and clinicopathologic information and biological process in DGC. Cell phenotype experiments combined with quantitative-PCR (q-PCR) and western blotting were utilized to identify the potential molecular mechanism underling ITGB1.Transcriptomics and proteomics both revealed that the higher ITGB1 expression was significantly associated with worse prognosis in DGC, but not in intestinal GC. Genomic analysis indicated that the mutation frequency of significantly mutated genes of ARID1A and COL11A1, and mutational signatures of SBS6 and SBS15 were markedly increased in the ITGB1 low expression subgroup. The enrichment analysis revealed diverse pathways related to dysregulation of ITGB1 in DGC, especially in cell adhesion, proliferation, metabolism reprogramming, and immune regulation alterations. Elevated activities of kinase-ROCK1, PKACA/PRKACA and AKT1 were observed in the ITGB1 high-expression subgroup. The ssGSEA analysis also found that ITGB1 low-expression had a higher cuproptosis score and was negatively correlated with key regulators of cuproptosis, including FDX1, DLAT, and DLST. We further observed that the upregulated expression of mitochondrial tricarboxylic acid (TCA) cycle in the ITGB1 low-expression group. Reduced expression of ITGB1 inhibited the ability of cell proliferation and motility and also potentiated the cell sensitive to copper ionophores via western blotting assay. Overall, this study revealed that ITGB1 was a protumorigenic gene and regulated tumor metabolism and cuproptosis in DGC. Frontiers Media S.A. 2023-03-16 /pmc/articles/PMC10063208/ /pubmed/37007126 http://dx.doi.org/10.3389/fonc.2023.1115510 Text en Copyright © 2023 Zhu, Chen, Li, Ren, Ye, Xu, Liu, Du, Zhang, Liu, Xie, Wang, Ma, Chong, Shang and Li https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Zhu, Xingyu
Chen, Hao
Li, Han
Ren, Huicheng
Ye, Chunshui
Xu, Kang
Liu, Jin
Du, Fengying
Zhang, Zihao
Liu, Yuan
Xie, Xiaozhou
Wang, Mingfei
Ma, Tianrong
Chong, Wei
Shang, Liang
Li, Leping
ITGB1-mediated molecular landscape and cuproptosis phenotype induced the worse prognosis in diffuse gastric cancer
title ITGB1-mediated molecular landscape and cuproptosis phenotype induced the worse prognosis in diffuse gastric cancer
title_full ITGB1-mediated molecular landscape and cuproptosis phenotype induced the worse prognosis in diffuse gastric cancer
title_fullStr ITGB1-mediated molecular landscape and cuproptosis phenotype induced the worse prognosis in diffuse gastric cancer
title_full_unstemmed ITGB1-mediated molecular landscape and cuproptosis phenotype induced the worse prognosis in diffuse gastric cancer
title_short ITGB1-mediated molecular landscape and cuproptosis phenotype induced the worse prognosis in diffuse gastric cancer
title_sort itgb1-mediated molecular landscape and cuproptosis phenotype induced the worse prognosis in diffuse gastric cancer
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10063208/
https://www.ncbi.nlm.nih.gov/pubmed/37007126
http://dx.doi.org/10.3389/fonc.2023.1115510
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