Cargando…

Deep Learning-Based Computed Tomography Image Standardization to Improve Generalizability of Deep Learning-Based Hepatic Segmentation

OBJECTIVE: We aimed to investigate whether image standardization using deep learning-based computed tomography (CT) image conversion would improve the performance of deep learning-based automated hepatic segmentation across various reconstruction methods. MATERIALS AND METHODS: We collected contrast...

Descripción completa

Detalles Bibliográficos
Autores principales: Lee, Seul Bi, Hong, Youngtaek, Cho, Yeon Jin, Jeong, Dawun, Lee, Jina, Yoon, Soon Ho, Lee, Seunghyun, Choi, Young Hun, Cheon, Jung-Eun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Korean Society of Radiology 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10067697/
https://www.ncbi.nlm.nih.gov/pubmed/36907592
http://dx.doi.org/10.3348/kjr.2022.0588
_version_ 1785018531055665152
author Lee, Seul Bi
Hong, Youngtaek
Cho, Yeon Jin
Jeong, Dawun
Lee, Jina
Yoon, Soon Ho
Lee, Seunghyun
Choi, Young Hun
Cheon, Jung-Eun
author_facet Lee, Seul Bi
Hong, Youngtaek
Cho, Yeon Jin
Jeong, Dawun
Lee, Jina
Yoon, Soon Ho
Lee, Seunghyun
Choi, Young Hun
Cheon, Jung-Eun
author_sort Lee, Seul Bi
collection PubMed
description OBJECTIVE: We aimed to investigate whether image standardization using deep learning-based computed tomography (CT) image conversion would improve the performance of deep learning-based automated hepatic segmentation across various reconstruction methods. MATERIALS AND METHODS: We collected contrast-enhanced dual-energy CT of the abdomen that was obtained using various reconstruction methods, including filtered back projection, iterative reconstruction, optimum contrast, and monoenergetic images with 40, 60, and 80 keV. A deep learning based image conversion algorithm was developed to standardize the CT images using 142 CT examinations (128 for training and 14 for tuning). A separate set of 43 CT examinations from 42 patients (mean age, 10.1 years) was used as the test data. A commercial software program (MEDIP PRO v2.0.0.0, MEDICALIP Co. Ltd.) based on 2D U-NET was used to create liver segmentation masks with liver volume. The original 80 keV images were used as the ground truth. We used the paired t-test to compare the segmentation performance in the Dice similarity coefficient (DSC) and difference ratio of the liver volume relative to the ground truth volume before and after image standardization. The concordance correlation coefficient (CCC) was used to assess the agreement between the segmented liver volume and ground-truth volume. RESULTS: The original CT images showed variable and poor segmentation performances. The standardized images achieved significantly higher DSCs for liver segmentation than the original images (DSC [original, 5.40%–91.27%] vs. [standardized, 93.16%–96.74%], all P < 0.001). The difference ratio of liver volume also decreased significantly after image conversion (original, 9.84%–91.37% vs. standardized, 1.99%–4.41%). In all protocols, CCCs improved after image conversion (original, -0.006–0.964 vs. standardized, 0.990–0.998). CONCLUSION: Deep learning-based CT image standardization can improve the performance of automated hepatic segmentation using CT images reconstructed using various methods. Deep learning-based CT image conversion may have the potential to improve the generalizability of the segmentation network.
format Online
Article
Text
id pubmed-10067697
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher The Korean Society of Radiology
record_format MEDLINE/PubMed
spelling pubmed-100676972023-04-04 Deep Learning-Based Computed Tomography Image Standardization to Improve Generalizability of Deep Learning-Based Hepatic Segmentation Lee, Seul Bi Hong, Youngtaek Cho, Yeon Jin Jeong, Dawun Lee, Jina Yoon, Soon Ho Lee, Seunghyun Choi, Young Hun Cheon, Jung-Eun Korean J Radiol Gastrointestinal Imaging OBJECTIVE: We aimed to investigate whether image standardization using deep learning-based computed tomography (CT) image conversion would improve the performance of deep learning-based automated hepatic segmentation across various reconstruction methods. MATERIALS AND METHODS: We collected contrast-enhanced dual-energy CT of the abdomen that was obtained using various reconstruction methods, including filtered back projection, iterative reconstruction, optimum contrast, and monoenergetic images with 40, 60, and 80 keV. A deep learning based image conversion algorithm was developed to standardize the CT images using 142 CT examinations (128 for training and 14 for tuning). A separate set of 43 CT examinations from 42 patients (mean age, 10.1 years) was used as the test data. A commercial software program (MEDIP PRO v2.0.0.0, MEDICALIP Co. Ltd.) based on 2D U-NET was used to create liver segmentation masks with liver volume. The original 80 keV images were used as the ground truth. We used the paired t-test to compare the segmentation performance in the Dice similarity coefficient (DSC) and difference ratio of the liver volume relative to the ground truth volume before and after image standardization. The concordance correlation coefficient (CCC) was used to assess the agreement between the segmented liver volume and ground-truth volume. RESULTS: The original CT images showed variable and poor segmentation performances. The standardized images achieved significantly higher DSCs for liver segmentation than the original images (DSC [original, 5.40%–91.27%] vs. [standardized, 93.16%–96.74%], all P < 0.001). The difference ratio of liver volume also decreased significantly after image conversion (original, 9.84%–91.37% vs. standardized, 1.99%–4.41%). In all protocols, CCCs improved after image conversion (original, -0.006–0.964 vs. standardized, 0.990–0.998). CONCLUSION: Deep learning-based CT image standardization can improve the performance of automated hepatic segmentation using CT images reconstructed using various methods. Deep learning-based CT image conversion may have the potential to improve the generalizability of the segmentation network. The Korean Society of Radiology 2023-04 2023-03-07 /pmc/articles/PMC10067697/ /pubmed/36907592 http://dx.doi.org/10.3348/kjr.2022.0588 Text en Copyright © 2023 The Korean Society of Radiology https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (https://creativecommons.org/licenses/by-nc/4.0 (https://creativecommons.org/licenses/by-nc/4.0/) ) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Gastrointestinal Imaging
Lee, Seul Bi
Hong, Youngtaek
Cho, Yeon Jin
Jeong, Dawun
Lee, Jina
Yoon, Soon Ho
Lee, Seunghyun
Choi, Young Hun
Cheon, Jung-Eun
Deep Learning-Based Computed Tomography Image Standardization to Improve Generalizability of Deep Learning-Based Hepatic Segmentation
title Deep Learning-Based Computed Tomography Image Standardization to Improve Generalizability of Deep Learning-Based Hepatic Segmentation
title_full Deep Learning-Based Computed Tomography Image Standardization to Improve Generalizability of Deep Learning-Based Hepatic Segmentation
title_fullStr Deep Learning-Based Computed Tomography Image Standardization to Improve Generalizability of Deep Learning-Based Hepatic Segmentation
title_full_unstemmed Deep Learning-Based Computed Tomography Image Standardization to Improve Generalizability of Deep Learning-Based Hepatic Segmentation
title_short Deep Learning-Based Computed Tomography Image Standardization to Improve Generalizability of Deep Learning-Based Hepatic Segmentation
title_sort deep learning-based computed tomography image standardization to improve generalizability of deep learning-based hepatic segmentation
topic Gastrointestinal Imaging
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10067697/
https://www.ncbi.nlm.nih.gov/pubmed/36907592
http://dx.doi.org/10.3348/kjr.2022.0588
work_keys_str_mv AT leeseulbi deeplearningbasedcomputedtomographyimagestandardizationtoimprovegeneralizabilityofdeeplearningbasedhepaticsegmentation
AT hongyoungtaek deeplearningbasedcomputedtomographyimagestandardizationtoimprovegeneralizabilityofdeeplearningbasedhepaticsegmentation
AT choyeonjin deeplearningbasedcomputedtomographyimagestandardizationtoimprovegeneralizabilityofdeeplearningbasedhepaticsegmentation
AT jeongdawun deeplearningbasedcomputedtomographyimagestandardizationtoimprovegeneralizabilityofdeeplearningbasedhepaticsegmentation
AT leejina deeplearningbasedcomputedtomographyimagestandardizationtoimprovegeneralizabilityofdeeplearningbasedhepaticsegmentation
AT yoonsoonho deeplearningbasedcomputedtomographyimagestandardizationtoimprovegeneralizabilityofdeeplearningbasedhepaticsegmentation
AT leeseunghyun deeplearningbasedcomputedtomographyimagestandardizationtoimprovegeneralizabilityofdeeplearningbasedhepaticsegmentation
AT choiyounghun deeplearningbasedcomputedtomographyimagestandardizationtoimprovegeneralizabilityofdeeplearningbasedhepaticsegmentation
AT cheonjungeun deeplearningbasedcomputedtomographyimagestandardizationtoimprovegeneralizabilityofdeeplearningbasedhepaticsegmentation