Cargando…

Assessing arthropod diversity metrics derived from stream environmental DNA: spatiotemporal variation and paired comparisons with manual sampling

BACKGROUND: Benthic invertebrate (BI) surveys have been widely used to characterize freshwater environmental quality but can be challenging to implement at desired spatial scales and frequency. Environmental DNA (eDNA) allows an alternative BI survey approach, one that can potentially be implemented...

Descripción completa

Detalles Bibliográficos
Autores principales:	Aunins, Aaron A., Mueller, Sara J., Fike, Jennifer A., Cornman, Robert S.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	PeerJ Inc. 2023
Materias:	Biodiversity
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10069422/ https://www.ncbi.nlm.nih.gov/pubmed/37020852 http://dx.doi.org/10.7717/peerj.15163

Ejemplares similares

Unearthing soil arthropod diversity through DNA metabarcoding
por: Young, Monica R., et al.
Publicado: (2022)

Meter scale variation in shrub dominance and soil moisture structure Arctic arthropod communities
por: Hansen, Rikke Reisner, et al.
Publicado: (2016)

Arthropods of the great indoors: characterizing diversity inside urban and suburban homes
por: Bertone, Matthew A., et al.
Publicado: (2016)

Changes of arthropod diversity across an altitudinal ecoregional zonation in Northwestern Argentina
por: González-Reyes, Andrea X., et al.
Publicado: (2017)

An experimental comparison of composite and grab sampling of stream water for metagenetic analysis of environmental DNA
por: Cornman, Robert S., et al.
Publicado: (2018)

Variation in the diversity and richness of parasitoid wasps based on sampling effort
por: Saunders, Thomas E., et al.
Publicado: (2018)

A bright idea—metabarcoding arthropods from light fixtures
por: Elbrecht, Vasco, et al.
Publicado: (2021)

A global meta-analytic contrast of cushion-plant effects on plants and on arthropods
por: Liczner, Amanda R., et al.
Publicado: (2014)

Assessment of North American arthropod collections: prospects and challenges for addressing biodiversity research
por: Cobb, Neil S., et al.
Publicado: (2019)

Virus discovery in all three major lineages of terrestrial arthropods highlights the diversity of single-stranded DNA viruses associated with invertebrates
por: Rosario, Karyna, et al.
Publicado: (2018)

Urbanization alters communities of flying arthropods in parks and gardens of a medium-sized city
por: Lagucki, Edward, et al.
Publicado: (2017)

Impervious surface and local abiotic conditions influence arthropod communities within urban greenspaces
por: Maher, Garrett M., et al.
Publicado: (2022)

Density and diversity of macroinvertebrates in Colombian Andean streams impacted by mining, agriculture and cattle production
por: Meza-Salazar, Ana M., et al.
Publicado: (2020)

Drivers of macroinvertebrate community structure in unmodified streams
por: Tonkin, Jonathan D.
Publicado: (2014)

Persisting roadblocks in arthropod monitoring using non-destructive metabarcoding from collection media of passive traps
por: Sire, Lucas, et al.
Publicado: (2023)

Spatiotemporal diversity, structure and trophic guilds of insect assemblages in a semi-arid Sabkha ecosystem
por: Chenchouni, Haroun, et al.
Publicado: (2015)

Non-repeatable science: assessing the frequency of voucher specimen deposition reveals that most arthropod research cannot be verified
por: Turney, Shaun, et al.
Publicado: (2015)

DNA metabarcoding allows non-invasive identification of arthropod prey provisioned to nestling Rufous hummingbirds (Selasphorus rufus)
por: Moran, Alison J., et al.
Publicado: (2019)

Aboveground and belowground arthropods experience different relative influences of stochastic versus deterministic community assembly processes following disturbance
por: Ferrenberg, Scott, et al.
Publicado: (2016)

Seasonal variations of the ichthyoplankton assemblage in the Yangtze Estuary and its relationship with environmental factors
por: Zhang, Hui, et al.
Publicado: (2019)

Do latitudinal gradients exist in New Zealand stream invertebrate metacommunities?
por: Tonkin, Jonathan D., et al.
Publicado: (2018)

Soil macro-fauna respond to environmental variations along a coastal-inland gradient
por: Zheng, Xiaoxue, et al.
Publicado: (2020)

Skin bacterial communities of neotropical treefrogs vary with local environmental conditions at the time of sampling
por: Estrada, Angie, et al.
Publicado: (2019)

Molecular identification and diversity of adult arthropod carrion community collected from pig and sheep carcasses within the same locality during different stages of decomposition in the KwaZulu-Natal province of South Africa
por: Tembe, Danisile, et al.
Publicado: (2021)

A comparison of common metrics used to quantify the effectiveness of conservation interventions
por: Khorozyan, Igor
Publicado: (2020)

Bacterial microbiota composition of Ixodes ricinus ticks: the role of environmental variation, tick characteristics and microbial interactions
por: Aivelo, Tuomas, et al.
Publicado: (2019)

Genomics of host-pathogen interactions: challenges and opportunities across ecological and spatiotemporal scales
por: Näpflin, Kathrin, et al.
Publicado: (2019)

Spatial variation in diatom abundance and composition in Biwase Bay and Hamanaka Bay (Eastern Hokkaido, Japan), with reference to environmental features
por: Ahn, Hyojin, et al.
Publicado: (2022)

Shark and ray diversity in the Tropical America (Neotropics)—an examination of environmental and historical factors affecting diversity
por: Carrillo-Briceño, Jorge Domingo, et al.
Publicado: (2018)

Genetic variation of the Chilean endemic long-haired mouse Abrothrix longipilis (Rodentia, Supramyomorpha, Cricetidae) in a geographical and environmental context
por: Valdez, Lourdes, et al.
Publicado: (2020)

Comparison of three clustering approaches for detecting novel environmental microbial diversity
por: Forster, Dominik, et al.
Publicado: (2016)

Integrating species and interactions into similarity metrics: a graph theory-based approach to understanding community similarity
por: López, Daniela N., et al.
Publicado: (2019)

Identifying environmental drivers of benthic diatom diversity: the case of Mediterranean mountain ponds
por: Blanco, Saúl, et al.
Publicado: (2020)

Effects of diversity and coalescence of species assemblages on ecosystem function at the margins of an environmental shift
por: Werba, Jo A., et al.
Publicado: (2020)

The tale of springs and streams: how different aquatic ecosystems impacted the mtDNA population structure of two riffle beetles in the Western Carpathians
por: Bozáňová, Jana, et al.
Publicado: (2020)

Urban habitat complexity affects species richness but not environmental filtering of morphologically-diverse ants
por: Ossola, Alessandro, et al.
Publicado: (2015)

Different environmental gradients affect different measures of snake β-diversity in the Amazon rainforests
por: de Fraga, Rafael, et al.
Publicado: (2018)

Biogeography, diversity and environmental relationships of shelf and deep-sea benthic Amphipoda around Iceland
por: Lörz, Anne-Nina, et al.
Publicado: (2021)

Diversity and distribution of Symbiodiniaceae detected on coral reefs of Lombok, Indonesia using environmental DNA metabarcoding
por: Pratomo, Arief, et al.
Publicado: (2022)

Temperature effects on pitfall catches of epigeal arthropods: a model and method for bias correction
por: Saska, Pavel, et al.
Publicado: (2013)

Cannot write session to /tmp/vufind_sessions/sess_h7nm0mpo4d6f8e6qslsehbhpin