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Interpretable, non-mechanistic forecasting using empirical dynamic modeling and interactive visualization
Forecasting methods are notoriously difficult to interpret, particularly when the relationship between the data and the resulting forecasts is not obvious. Interpretability is an important property of a forecasting method because it allows the user to complement the forecasts with their own knowledg...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10069763/ https://www.ncbi.nlm.nih.gov/pubmed/37011060 http://dx.doi.org/10.1371/journal.pone.0277149 |
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author | Mason, Lee Berrington de Gonzalez, Amy Garcia-Closas, Montserrat Chanock, Stephen J. Hicks, Blànaid Almeida, Jonas S. |
author_facet | Mason, Lee Berrington de Gonzalez, Amy Garcia-Closas, Montserrat Chanock, Stephen J. Hicks, Blànaid Almeida, Jonas S. |
author_sort | Mason, Lee |
collection | PubMed |
description | Forecasting methods are notoriously difficult to interpret, particularly when the relationship between the data and the resulting forecasts is not obvious. Interpretability is an important property of a forecasting method because it allows the user to complement the forecasts with their own knowledge, a process which leads to more applicable results. In general, mechanistic methods are more interpretable than non-mechanistic methods, but they require explicit knowledge of the underlying dynamics. In this paper, we introduce EpiForecast, a tool which performs interpretable, non-mechanistic forecasts using interactive visualization and a simple, data-focused forecasting technique based on empirical dynamic modelling. EpiForecast’s primary feature is a four-plot interactive dashboard which displays a variety of information to help the user understand how the forecasts are generated. In addition to point forecasts, the tool produces distributional forecasts using a kernel density estimation method–these are visualized using color gradients to produce a quick, intuitive visual summary of the estimated future. To ensure the work is FAIR and privacy is ensured, we have released the tool as an entirely in-browser web-application. |
format | Online Article Text |
id | pubmed-10069763 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-100697632023-04-04 Interpretable, non-mechanistic forecasting using empirical dynamic modeling and interactive visualization Mason, Lee Berrington de Gonzalez, Amy Garcia-Closas, Montserrat Chanock, Stephen J. Hicks, Blànaid Almeida, Jonas S. PLoS One Research Article Forecasting methods are notoriously difficult to interpret, particularly when the relationship between the data and the resulting forecasts is not obvious. Interpretability is an important property of a forecasting method because it allows the user to complement the forecasts with their own knowledge, a process which leads to more applicable results. In general, mechanistic methods are more interpretable than non-mechanistic methods, but they require explicit knowledge of the underlying dynamics. In this paper, we introduce EpiForecast, a tool which performs interpretable, non-mechanistic forecasts using interactive visualization and a simple, data-focused forecasting technique based on empirical dynamic modelling. EpiForecast’s primary feature is a four-plot interactive dashboard which displays a variety of information to help the user understand how the forecasts are generated. In addition to point forecasts, the tool produces distributional forecasts using a kernel density estimation method–these are visualized using color gradients to produce a quick, intuitive visual summary of the estimated future. To ensure the work is FAIR and privacy is ensured, we have released the tool as an entirely in-browser web-application. Public Library of Science 2023-04-03 /pmc/articles/PMC10069763/ /pubmed/37011060 http://dx.doi.org/10.1371/journal.pone.0277149 Text en https://creativecommons.org/publicdomain/zero/1.0/This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication. |
spellingShingle | Research Article Mason, Lee Berrington de Gonzalez, Amy Garcia-Closas, Montserrat Chanock, Stephen J. Hicks, Blànaid Almeida, Jonas S. Interpretable, non-mechanistic forecasting using empirical dynamic modeling and interactive visualization |
title | Interpretable, non-mechanistic forecasting using empirical dynamic modeling and interactive visualization |
title_full | Interpretable, non-mechanistic forecasting using empirical dynamic modeling and interactive visualization |
title_fullStr | Interpretable, non-mechanistic forecasting using empirical dynamic modeling and interactive visualization |
title_full_unstemmed | Interpretable, non-mechanistic forecasting using empirical dynamic modeling and interactive visualization |
title_short | Interpretable, non-mechanistic forecasting using empirical dynamic modeling and interactive visualization |
title_sort | interpretable, non-mechanistic forecasting using empirical dynamic modeling and interactive visualization |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10069763/ https://www.ncbi.nlm.nih.gov/pubmed/37011060 http://dx.doi.org/10.1371/journal.pone.0277149 |
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