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Recent progress in atomistic modeling of light-harvesting complexes: a mini review

In this mini review, we focus on recent advances in the atomistic modeling of biological light-harvesting (LH) complexes. Because of their size and sophisticated electronic structures, multiscale methods are required to investigate the dynamical and spectroscopic properties of such complexes. The ex...

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Autores principales: Maity, Sayan, Kleinekathöfer, Ulrich
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Netherlands 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10070314/
https://www.ncbi.nlm.nih.gov/pubmed/36207489
http://dx.doi.org/10.1007/s11120-022-00969-w
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author Maity, Sayan
Kleinekathöfer, Ulrich
author_facet Maity, Sayan
Kleinekathöfer, Ulrich
author_sort Maity, Sayan
collection PubMed
description In this mini review, we focus on recent advances in the atomistic modeling of biological light-harvesting (LH) complexes. Because of their size and sophisticated electronic structures, multiscale methods are required to investigate the dynamical and spectroscopic properties of such complexes. The excitation energies, in this context also known as site energies, excitonic couplings, and spectral densities are key quantities which usually need to be extracted to be able to determine the exciton dynamics and spectroscopic properties. The recently developed multiscale approach based on the numerically efficient density functional tight-binding framework followed by excited state calculations has been shown to be superior to the scheme based on pure classical molecular dynamics simulations. The enhanced approach, which improves the description of the internal vibrational dynamics of the pigment molecules, yields spectral densities in good agreement with the experimental counterparts for various bacterial and plant LH systems. Here, we provide a brief overview of those results and described the theoretical foundation of the multiscale protocol.
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spelling pubmed-100703142023-04-05 Recent progress in atomistic modeling of light-harvesting complexes: a mini review Maity, Sayan Kleinekathöfer, Ulrich Photosynth Res Review In this mini review, we focus on recent advances in the atomistic modeling of biological light-harvesting (LH) complexes. Because of their size and sophisticated electronic structures, multiscale methods are required to investigate the dynamical and spectroscopic properties of such complexes. The excitation energies, in this context also known as site energies, excitonic couplings, and spectral densities are key quantities which usually need to be extracted to be able to determine the exciton dynamics and spectroscopic properties. The recently developed multiscale approach based on the numerically efficient density functional tight-binding framework followed by excited state calculations has been shown to be superior to the scheme based on pure classical molecular dynamics simulations. The enhanced approach, which improves the description of the internal vibrational dynamics of the pigment molecules, yields spectral densities in good agreement with the experimental counterparts for various bacterial and plant LH systems. Here, we provide a brief overview of those results and described the theoretical foundation of the multiscale protocol. Springer Netherlands 2022-10-07 2023 /pmc/articles/PMC10070314/ /pubmed/36207489 http://dx.doi.org/10.1007/s11120-022-00969-w Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Review
Maity, Sayan
Kleinekathöfer, Ulrich
Recent progress in atomistic modeling of light-harvesting complexes: a mini review
title Recent progress in atomistic modeling of light-harvesting complexes: a mini review
title_full Recent progress in atomistic modeling of light-harvesting complexes: a mini review
title_fullStr Recent progress in atomistic modeling of light-harvesting complexes: a mini review
title_full_unstemmed Recent progress in atomistic modeling of light-harvesting complexes: a mini review
title_short Recent progress in atomistic modeling of light-harvesting complexes: a mini review
title_sort recent progress in atomistic modeling of light-harvesting complexes: a mini review
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10070314/
https://www.ncbi.nlm.nih.gov/pubmed/36207489
http://dx.doi.org/10.1007/s11120-022-00969-w
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