Cargando…
ViroProfiler: a containerized bioinformatics pipeline for viral metagenomic data analysis
Bacteriophages play central roles in the maintenance and function of most ecosystems by regulating bacterial communities. Yet, our understanding of their diversity remains limited due to the lack of robust bioinformatics standards. Here we present ViroProfiler, an in-silico workflow for analyzing sh...
Autores principales: | Ru, Jinlong, Khan Mirzaei, Mohammadali, Xue, Jinling, Peng, Xue, Deng, Li |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10072060/ https://www.ncbi.nlm.nih.gov/pubmed/36998174 http://dx.doi.org/10.1080/19490976.2023.2192522 |
Ejemplares similares
-
ViroMatch: A Computational Pipeline for the Detection of Viral Sequences from Complex Metagenomic Data
por: Wylie, Todd N., et al.
Publicado: (2021) -
Container Profiler: Profiling resource utilization of containerized big data pipelines
por: Hoang, Varik, et al.
Publicado: (2023) -
Recommendations for the packaging and containerizing of bioinformatics software
por: Gruening, Bjorn, et al.
Publicado: (2019) -
Gut virome profiling identifies an association between temperate phages and colorectal cancer promoted by Helicobacter pylori infection
por: Luo, Shiqi, et al.
Publicado: (2023) -
YAMP: a containerized workflow enabling reproducibility in metagenomics research
por: Visconti, Alessia, et al.
Publicado: (2018)