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Interactive process mining of cancer treatment sequences with melanoma real-world data

The growing availability of clinical real-world data (RWD) represents a formidable opportunity to complement evidence from randomized clinical trials and observe how oncological treatments perform in real-life conditions. In particular, RWD can provide insights on questions for which no clinical tri...

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Autores principales: Wicky, Alexandre, Gatta, Roberto, Latifyan, Sofiya, Micheli, Rita De, Gerard, Camille, Pradervand, Sylvain, Michielin, Olivier, Cuendet, Michel A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10072205/
https://www.ncbi.nlm.nih.gov/pubmed/37025593
http://dx.doi.org/10.3389/fonc.2023.1043683
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author Wicky, Alexandre
Gatta, Roberto
Latifyan, Sofiya
Micheli, Rita De
Gerard, Camille
Pradervand, Sylvain
Michielin, Olivier
Cuendet, Michel A.
author_facet Wicky, Alexandre
Gatta, Roberto
Latifyan, Sofiya
Micheli, Rita De
Gerard, Camille
Pradervand, Sylvain
Michielin, Olivier
Cuendet, Michel A.
author_sort Wicky, Alexandre
collection PubMed
description The growing availability of clinical real-world data (RWD) represents a formidable opportunity to complement evidence from randomized clinical trials and observe how oncological treatments perform in real-life conditions. In particular, RWD can provide insights on questions for which no clinical trials exist, such as comparing outcomes from different sequences of treatments. To this end, process mining is a particularly suitable methodology for analyzing different treatment paths and their associated outcomes. Here, we describe an implementation of process mining algorithms directly within our hospital information system with an interactive application that allows oncologists to compare sequences of treatments in terms of overall survival, progression-free survival and best overall response. As an application example, we first performed a RWD descriptive analysis of 303 patients with advanced melanoma and reproduced findings observed in two notorious clinical trials: CheckMate-067 and DREAMseq. Then, we explored the outcomes of an immune-checkpoint inhibitor rechallenge after a first progression on immunotherapy versus switching to a BRAF targeted treatment. By using interactive process-oriented RWD analysis, we observed that patients still derive long-term survival benefits from immune-checkpoint inhibitors rechallenge, which could have direct implications on treatment guidelines for patients able to carry on immune-checkpoint therapy, if confirmed by external RWD and randomized clinical trials. Overall, our results highlight how an interactive implementation of process mining can lead to clinically relevant insights from RWD with a framework that can be ported to other centers or networks of centers.
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spelling pubmed-100722052023-04-05 Interactive process mining of cancer treatment sequences with melanoma real-world data Wicky, Alexandre Gatta, Roberto Latifyan, Sofiya Micheli, Rita De Gerard, Camille Pradervand, Sylvain Michielin, Olivier Cuendet, Michel A. Front Oncol Oncology The growing availability of clinical real-world data (RWD) represents a formidable opportunity to complement evidence from randomized clinical trials and observe how oncological treatments perform in real-life conditions. In particular, RWD can provide insights on questions for which no clinical trials exist, such as comparing outcomes from different sequences of treatments. To this end, process mining is a particularly suitable methodology for analyzing different treatment paths and their associated outcomes. Here, we describe an implementation of process mining algorithms directly within our hospital information system with an interactive application that allows oncologists to compare sequences of treatments in terms of overall survival, progression-free survival and best overall response. As an application example, we first performed a RWD descriptive analysis of 303 patients with advanced melanoma and reproduced findings observed in two notorious clinical trials: CheckMate-067 and DREAMseq. Then, we explored the outcomes of an immune-checkpoint inhibitor rechallenge after a first progression on immunotherapy versus switching to a BRAF targeted treatment. By using interactive process-oriented RWD analysis, we observed that patients still derive long-term survival benefits from immune-checkpoint inhibitors rechallenge, which could have direct implications on treatment guidelines for patients able to carry on immune-checkpoint therapy, if confirmed by external RWD and randomized clinical trials. Overall, our results highlight how an interactive implementation of process mining can lead to clinically relevant insights from RWD with a framework that can be ported to other centers or networks of centers. Frontiers Media S.A. 2023-03-21 /pmc/articles/PMC10072205/ /pubmed/37025593 http://dx.doi.org/10.3389/fonc.2023.1043683 Text en Copyright © 2023 Wicky, Gatta, Latifyan, Micheli, Gerard, Pradervand, Michielin and Cuendet https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Wicky, Alexandre
Gatta, Roberto
Latifyan, Sofiya
Micheli, Rita De
Gerard, Camille
Pradervand, Sylvain
Michielin, Olivier
Cuendet, Michel A.
Interactive process mining of cancer treatment sequences with melanoma real-world data
title Interactive process mining of cancer treatment sequences with melanoma real-world data
title_full Interactive process mining of cancer treatment sequences with melanoma real-world data
title_fullStr Interactive process mining of cancer treatment sequences with melanoma real-world data
title_full_unstemmed Interactive process mining of cancer treatment sequences with melanoma real-world data
title_short Interactive process mining of cancer treatment sequences with melanoma real-world data
title_sort interactive process mining of cancer treatment sequences with melanoma real-world data
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10072205/
https://www.ncbi.nlm.nih.gov/pubmed/37025593
http://dx.doi.org/10.3389/fonc.2023.1043683
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