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Bacterial and fungal diversities examined through high-throughput sequencing in response to lead contamination of tea garden soil

Several studies have indicated that the heavy-metal content in tea is increasing gradually. Researchers examining the soil of more than 100 tea gardens in China have observed that lead content was higher in some soils. The effect of lead contamination on soil microorganisms in tea gardens was studie...

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Autores principales: Zhang, Ziyan, Deng, Qingmei, Ye, Hui, Ge, Gaofei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10073568/
https://www.ncbi.nlm.nih.gov/pubmed/37032858
http://dx.doi.org/10.3389/fmicb.2023.1121199
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author Zhang, Ziyan
Deng, Qingmei
Ye, Hui
Ge, Gaofei
author_facet Zhang, Ziyan
Deng, Qingmei
Ye, Hui
Ge, Gaofei
author_sort Zhang, Ziyan
collection PubMed
description Several studies have indicated that the heavy-metal content in tea is increasing gradually. Researchers examining the soil of more than 100 tea gardens in China have observed that lead content was higher in some soils. The effect of lead contamination on soil microorganisms in tea gardens was studied to determine the effect of lead on the essential functions of microorganisms in a tea garden soil ecosystem. Previous studies on pot experiments adopted the method of adding a single instance of pollution, which failed to comprehensively simulate the characteristics of the slow accumulation of heavy metals in soil. This study designed with two pollution modes (multistage and single instance) determined the content of soil lead in different forms according to the European Community Bureau of Reference extraction procedure. The community structure, species diversity and functional abundance of soil bacteria and fungi were examined by high-throughput sequencing. We observed that the content of four forms of lead was higher in the multistage contamination mode than in the single instance contamination mode. The effects of lead contamination on bacteria differed significantly (p < 0.05), and the abundance and diversity of bacteria were higher in the multistage contamination mode than in the single instance contamination mode. The community structure of fungi was more affected by lead than was that of bacteria. The content of each lead form was the environmental factor most strongly affecting soil bacteria and fungi. The predicted main function of the bacterial community was amino acid transport and metabolism, and the trophic mode of the fungal community was mainly pathotroph–saprotroph. This study revealed changes in soil microorganisms caused by different forms of lead and contamination methods in tea garden soil and provide a theoretical basis for examining the effects of lead contamination on soil microorganisms.
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spelling pubmed-100735682023-04-06 Bacterial and fungal diversities examined through high-throughput sequencing in response to lead contamination of tea garden soil Zhang, Ziyan Deng, Qingmei Ye, Hui Ge, Gaofei Front Microbiol Microbiology Several studies have indicated that the heavy-metal content in tea is increasing gradually. Researchers examining the soil of more than 100 tea gardens in China have observed that lead content was higher in some soils. The effect of lead contamination on soil microorganisms in tea gardens was studied to determine the effect of lead on the essential functions of microorganisms in a tea garden soil ecosystem. Previous studies on pot experiments adopted the method of adding a single instance of pollution, which failed to comprehensively simulate the characteristics of the slow accumulation of heavy metals in soil. This study designed with two pollution modes (multistage and single instance) determined the content of soil lead in different forms according to the European Community Bureau of Reference extraction procedure. The community structure, species diversity and functional abundance of soil bacteria and fungi were examined by high-throughput sequencing. We observed that the content of four forms of lead was higher in the multistage contamination mode than in the single instance contamination mode. The effects of lead contamination on bacteria differed significantly (p < 0.05), and the abundance and diversity of bacteria were higher in the multistage contamination mode than in the single instance contamination mode. The community structure of fungi was more affected by lead than was that of bacteria. The content of each lead form was the environmental factor most strongly affecting soil bacteria and fungi. The predicted main function of the bacterial community was amino acid transport and metabolism, and the trophic mode of the fungal community was mainly pathotroph–saprotroph. This study revealed changes in soil microorganisms caused by different forms of lead and contamination methods in tea garden soil and provide a theoretical basis for examining the effects of lead contamination on soil microorganisms. Frontiers Media S.A. 2023-03-22 /pmc/articles/PMC10073568/ /pubmed/37032858 http://dx.doi.org/10.3389/fmicb.2023.1121199 Text en Copyright © 2023 Zhang, Deng, Ye and Ge. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Zhang, Ziyan
Deng, Qingmei
Ye, Hui
Ge, Gaofei
Bacterial and fungal diversities examined through high-throughput sequencing in response to lead contamination of tea garden soil
title Bacterial and fungal diversities examined through high-throughput sequencing in response to lead contamination of tea garden soil
title_full Bacterial and fungal diversities examined through high-throughput sequencing in response to lead contamination of tea garden soil
title_fullStr Bacterial and fungal diversities examined through high-throughput sequencing in response to lead contamination of tea garden soil
title_full_unstemmed Bacterial and fungal diversities examined through high-throughput sequencing in response to lead contamination of tea garden soil
title_short Bacterial and fungal diversities examined through high-throughput sequencing in response to lead contamination of tea garden soil
title_sort bacterial and fungal diversities examined through high-throughput sequencing in response to lead contamination of tea garden soil
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10073568/
https://www.ncbi.nlm.nih.gov/pubmed/37032858
http://dx.doi.org/10.3389/fmicb.2023.1121199
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