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Neural network potentials for accelerated metadynamics of oxygen reduction kinetics at Au–water interfaces

The application of ab initio molecular dynamics (AIMD) for the explicit modeling of reactions at solid–liquid interfaces in electrochemical energy conversion systems like batteries and fuel cells can provide new understandings towards reaction mechanisms. However, its prohibitive computational cost...

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Autores principales: Yang, Xin, Bhowmik, Arghya, Vegge, Tejs, Hansen, Heine Anton
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10074416/
https://www.ncbi.nlm.nih.gov/pubmed/37035698
http://dx.doi.org/10.1039/d2sc06696c
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author Yang, Xin
Bhowmik, Arghya
Vegge, Tejs
Hansen, Heine Anton
author_facet Yang, Xin
Bhowmik, Arghya
Vegge, Tejs
Hansen, Heine Anton
author_sort Yang, Xin
collection PubMed
description The application of ab initio molecular dynamics (AIMD) for the explicit modeling of reactions at solid–liquid interfaces in electrochemical energy conversion systems like batteries and fuel cells can provide new understandings towards reaction mechanisms. However, its prohibitive computational cost severely restricts the time- and length-scales of AIMD. Equivariant graph neural network (GNN) based accurate surrogate potentials can accelerate the speed of performing molecular dynamics after learning on representative structures in a data efficient manner. In this study, we combined uncertainty-aware GNN potentials and enhanced sampling to investigate the reactive process of the oxygen reduction reaction (ORR) at an Au(100)–water interface. By using a well-established active learning framework based on CUR matrix decomposition, we can evenly sample equilibrium structures from MD simulations and non-equilibrium reaction intermediates that are rarely visited during the reaction. The trained GNNs have shown exceptional performance in terms of force prediction accuracy, the ability to reproduce structural properties, and low uncertainties when performing MD and metadynamics simulations. Furthermore, the collective variables employed in this work enabled the automatic search of reaction pathways and provide a detailed understanding towards the ORR reaction mechanism on Au(100). Our simulations identified the associative reaction mechanism without the presence of *O and a low reaction barrier of 0.3 eV, which is in agreement with experimental findings. The methodology employed in this study can pave the way for modeling complex chemical reactions at electrochemical interfaces with an explicit solvent under ambient conditions.
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spelling pubmed-100744162023-04-06 Neural network potentials for accelerated metadynamics of oxygen reduction kinetics at Au–water interfaces Yang, Xin Bhowmik, Arghya Vegge, Tejs Hansen, Heine Anton Chem Sci Chemistry The application of ab initio molecular dynamics (AIMD) for the explicit modeling of reactions at solid–liquid interfaces in electrochemical energy conversion systems like batteries and fuel cells can provide new understandings towards reaction mechanisms. However, its prohibitive computational cost severely restricts the time- and length-scales of AIMD. Equivariant graph neural network (GNN) based accurate surrogate potentials can accelerate the speed of performing molecular dynamics after learning on representative structures in a data efficient manner. In this study, we combined uncertainty-aware GNN potentials and enhanced sampling to investigate the reactive process of the oxygen reduction reaction (ORR) at an Au(100)–water interface. By using a well-established active learning framework based on CUR matrix decomposition, we can evenly sample equilibrium structures from MD simulations and non-equilibrium reaction intermediates that are rarely visited during the reaction. The trained GNNs have shown exceptional performance in terms of force prediction accuracy, the ability to reproduce structural properties, and low uncertainties when performing MD and metadynamics simulations. Furthermore, the collective variables employed in this work enabled the automatic search of reaction pathways and provide a detailed understanding towards the ORR reaction mechanism on Au(100). Our simulations identified the associative reaction mechanism without the presence of *O and a low reaction barrier of 0.3 eV, which is in agreement with experimental findings. The methodology employed in this study can pave the way for modeling complex chemical reactions at electrochemical interfaces with an explicit solvent under ambient conditions. The Royal Society of Chemistry 2023-03-13 /pmc/articles/PMC10074416/ /pubmed/37035698 http://dx.doi.org/10.1039/d2sc06696c Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by/3.0/
spellingShingle Chemistry
Yang, Xin
Bhowmik, Arghya
Vegge, Tejs
Hansen, Heine Anton
Neural network potentials for accelerated metadynamics of oxygen reduction kinetics at Au–water interfaces
title Neural network potentials for accelerated metadynamics of oxygen reduction kinetics at Au–water interfaces
title_full Neural network potentials for accelerated metadynamics of oxygen reduction kinetics at Au–water interfaces
title_fullStr Neural network potentials for accelerated metadynamics of oxygen reduction kinetics at Au–water interfaces
title_full_unstemmed Neural network potentials for accelerated metadynamics of oxygen reduction kinetics at Au–water interfaces
title_short Neural network potentials for accelerated metadynamics of oxygen reduction kinetics at Au–water interfaces
title_sort neural network potentials for accelerated metadynamics of oxygen reduction kinetics at au–water interfaces
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10074416/
https://www.ncbi.nlm.nih.gov/pubmed/37035698
http://dx.doi.org/10.1039/d2sc06696c
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AT veggetejs neuralnetworkpotentialsforacceleratedmetadynamicsofoxygenreductionkineticsatauwaterinterfaces
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