Cargando…

Connectome and regulatory hubs of CAGE highly active enhancers

Evidence indicates that enhancers are transcriptionally active. Herein, we investigated transcriptionally active enhancers by using cap analysis of gene expression (CAGE) combined with epigenetic marks and chromatin interactions. We identified CAGE-tag highly active (CHA) enhancers as distant regula...

Descripción completa

Detalles Bibliográficos
Autores principales:	Briend, Mewen, Rufiange, Anne, Moncla, Louis-Hippolyte Minvielle, Mathieu, Samuel, Bossé, Yohan, Mathieu, Patrick
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group UK 2023
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10076288/ https://www.ncbi.nlm.nih.gov/pubmed/37019979 http://dx.doi.org/10.1038/s41598-023-32669-3

Ejemplares similares

Mendelian randomization of circulating proteome identifies actionable targets in heart failure
por: Moncla, Louis-Hippolyte Minvielle, et al.
Publicado: (2022)

Genetic association and Mendelian randomization for hypothyroidism highlight immune molecular mechanisms
por: Mathieu, Samuel, et al.
Publicado: (2022)

Enhancer promoter interactome and Mendelian randomization identify network of druggable vascular genes in coronary artery disease
por: Chignon, Arnaud, et al.
Publicado: (2022)

Emerging hubs in phantom perception connectomics
por: Mohan, Anusha, et al.
Publicado: (2016)

Genetic influences on hub connectivity of the human connectome
por: Arnatkeviciute, Aurina, et al.
Publicado: (2021)

Enhancer-associated aortic valve stenosis risk locus 1p21.2 alters NFATC2 binding site and promotes fibrogenesis
por: Chignon, Arnaud, et al.
Publicado: (2021)

Probabilistic Clustering of the Human Connectome Identifies Communities and Hubs
por: Hinne, Max, et al.
Publicado: (2015)

Meta-connectomic analysis maps consistent, reproducible, and transcriptionally relevant functional connectome hubs in the human brain
por: Xu, Zhilei, et al.
Publicado: (2022)

The hubs of the human connectome are generally implicated in the anatomy of brain disorders
por: Crossley, Nicolas A., et al.
Publicado: (2014)

The AII amacrine cell connectome: a dense network hub
por: Marc, Robert E., et al.
Publicado: (2014)

Hub connectivity, neuronal diversity, and gene expression in the Caenorhabditis elegans connectome
por: Arnatkevic̆iūtė, Aurina, et al.
Publicado: (2018)

The topology of higher-order complexes associated with brain hubs in human connectomes
por: Andjelković, Miroslav, et al.
Publicado: (2020)

Connectome hubs at resting state in children and adolescents: Reproducibility and psychopathological correlation
por: Sato, João Ricardo, et al.
Publicado: (2016)

Kuramoto model simulation of neural hubs and dynamic synchrony in the human cerebral connectome
por: Schmidt, Ruben, et al.
Publicado: (2015)

Dynamic model of whole cortex reveals disassortative hub structure in the intracortical connectome
por: Gilson, Matthieu, et al.
Publicado: (2015)

The resting-state causal human connectome is characterized by hub connectivity of executive and attentional networks
por: Rawls, Eric, et al.
Publicado: (2022)

Acetylsalicylic acid, aging and coronary artery disease are associated with ABCA1 DNA methylation in men
por: Guay, Simon-Pierre, et al.
Publicado: (2014)

Enhancers and chromatin structures: regulatory hubs in gene expression and diseases
por: Hu, Zhenhua, et al.
Publicado: (2017)

ComHub: Community predictions of hubs in gene regulatory networks
por: Åkesson, Julia, et al.
Publicado: (2021)

High Expression of the Pi-Transporter SLC20A1/Pit1 in Calcific Aortic Valve Disease Promotes Mineralization through Regulation of Akt-1
por: El Husseini, Diala, et al.
Publicado: (2013)

High-resolution directed human connectomes and the Consensus Connectome Dynamics
por: Szalkai, Balázs, et al.
Publicado: (2019)

Altered Hub Functioning and Compensatory Activations in the Connectome: A Meta-Analysis of Functional Neuroimaging Studies in Schizophrenia
por: Crossley, Nicolas A., et al.
Publicado: (2016)

Phenome-wide analyses establish a specific association between aortic valve PALMD expression and calcific aortic valve stenosis
por: Li, Zhonglin, et al.
Publicado: (2020)

Enhanced construction of gene regulatory networks using hub gene information
por: Yu, Donghyeon, et al.
Publicado: (2017)

Genome-wide chromatin contacts of super-enhancer-associated lncRNA identify LINC01013 as a regulator of fibrosis in the aortic valve
por: Chignon, Arnaud, et al.
Publicado: (2022)

Helminth-infected patients with malaria: a low profile transmission hub?
por: Nacher, Mathieu
Publicado: (2012)

Analysis Tools for Large Connectomes
por: Scheffer, Louis K.
Publicado: (2018)

A genetically specified connectomics approach applied to long-range feeding regulatory circuits
por: Atasoy, Deniz, et al.
Publicado: (2014)

Group-Level Ranking-Based Hubness Analysis of Human Brain Connectome Reveals Significant Interhemispheric Asymmetry and Intraparcel Heterogeneities
por: Hanalioglu, Sahin, et al.
Publicado: (2021)

Two Cases of Injury to the Abdomen Having a Period of Latency, and Thereafter Proving Rapidly Fatal
por: M'Ewen, William
Publicado: (1872)

The Transcriptome of Human Epicardial, Mediastinal and Subcutaneous Adipose Tissues in Men with Coronary Artery Disease
por: Guauque-Olarte, Sandra, et al.
Publicado: (2011)

Identification of hub genes and construction of transcriptional regulatory network for the progression of colon adenocarcinoma hub genes and TF regulatory network of colon adenocarcinoma
por: Wei, Shuxun, et al.
Publicado: (2019)

Correspondence
por: M'Ewen, Henry C.
Publicado: (1888)

A Mendelian randomization study of IL6 signaling in cardiovascular diseases, immune-related disorders and longevity
por: Rosa, Mickael, et al.
Publicado: (2019)

The Banana Genome Hub
por: Droc, Gaëtan, et al.
Publicado: (2013)

Enhanced functional connectome of cerebellum in chronic insomnia patients
por: Lin, Shiqi, et al.
Publicado: (2023)

Sequencing the Connectome
por: Zador, Anthony M., et al.
Publicado: (2012)

Age, Sex, and Valve Phenotype Differences in Fibro‐Calcific Remodeling of Calcified Aortic Valve
por: Voisine, Martine, et al.
Publicado: (2020)

The Connectome and Chemo-Connectome Databases for Mice Brain Connection Analysis
por: Wang, Yang, et al.
Publicado: (2022)

Chromatin fiber structural motifs as regulatory hubs of genome function?
por: Moraru, Manuela, et al.
Publicado: (2019)

Cannot write session to /tmp/vufind_sessions/sess_l5peto4791eokg0vet35l4aa9o