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Gelsolin: A comprehensive pan-cancer analysis of potential prognosis, diagnostic, and immune biomarkers
Introduction: Gelsolin (GSN), a calcium-regulated actin-binding protein, is out of balance in various cancers. It can mediate cytoskeletal remodeling and regulate epithelial-mesenchymal conversion (EMT), but the studies on GSN function in pan-cancer are limited. Methods: We studied the transcription...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10076574/ https://www.ncbi.nlm.nih.gov/pubmed/37035750 http://dx.doi.org/10.3389/fgene.2023.1093163 |
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author | Wang, Yiyang Bi, Xiaojuan Luo, Zhiwen Wang, Haiyan Ismtula, Dilimulati Guo, Chenming |
author_facet | Wang, Yiyang Bi, Xiaojuan Luo, Zhiwen Wang, Haiyan Ismtula, Dilimulati Guo, Chenming |
author_sort | Wang, Yiyang |
collection | PubMed |
description | Introduction: Gelsolin (GSN), a calcium-regulated actin-binding protein, is out of balance in various cancers. It can mediate cytoskeletal remodeling and regulate epithelial-mesenchymal conversion (EMT), but the studies on GSN function in pan-cancer are limited. Methods: We studied the transcription level, prognostic impact, diagnostic value, genetic, epigenetic modification, methylation level and immune significance of GSN in pan-cancer to fully comprehend the function of GSN in various malignancies based on multiple databases like The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO). Results: Pan-cancer research showed that GSN was downregulated in most tumors and expressed differently in immunological and molecular subtypes of many cancers. GSN had varying impacts on the prognosis of various tumor types. However, all had moderate to high diagnostic efficiency, and serum GSN had good diagnostic value in breast cancer patients (AUC = 0.947). Moreover, GSN was a distinguishing prognosis factor for some specific cancer types. The GSN protein was hypophosphorylated, and its promoter was hypermethylated in most cancers. GSN was linked to the infiltration level of several immunity cells and was essential in anti-tumor immune cell infiltration. KEGG and GSEA analyses showed that GSN was vital in the functions and proteoglycans processes in cancer, chemokine signaling pathway and other immune-related pathways, DNA methylation and cell cycle. Discussion: In conclusion, GSN possesses the ability to be a predictive, diagnostic, and immune indicator in pan-cancer. |
format | Online Article Text |
id | pubmed-10076574 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-100765742023-04-07 Gelsolin: A comprehensive pan-cancer analysis of potential prognosis, diagnostic, and immune biomarkers Wang, Yiyang Bi, Xiaojuan Luo, Zhiwen Wang, Haiyan Ismtula, Dilimulati Guo, Chenming Front Genet Genetics Introduction: Gelsolin (GSN), a calcium-regulated actin-binding protein, is out of balance in various cancers. It can mediate cytoskeletal remodeling and regulate epithelial-mesenchymal conversion (EMT), but the studies on GSN function in pan-cancer are limited. Methods: We studied the transcription level, prognostic impact, diagnostic value, genetic, epigenetic modification, methylation level and immune significance of GSN in pan-cancer to fully comprehend the function of GSN in various malignancies based on multiple databases like The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO). Results: Pan-cancer research showed that GSN was downregulated in most tumors and expressed differently in immunological and molecular subtypes of many cancers. GSN had varying impacts on the prognosis of various tumor types. However, all had moderate to high diagnostic efficiency, and serum GSN had good diagnostic value in breast cancer patients (AUC = 0.947). Moreover, GSN was a distinguishing prognosis factor for some specific cancer types. The GSN protein was hypophosphorylated, and its promoter was hypermethylated in most cancers. GSN was linked to the infiltration level of several immunity cells and was essential in anti-tumor immune cell infiltration. KEGG and GSEA analyses showed that GSN was vital in the functions and proteoglycans processes in cancer, chemokine signaling pathway and other immune-related pathways, DNA methylation and cell cycle. Discussion: In conclusion, GSN possesses the ability to be a predictive, diagnostic, and immune indicator in pan-cancer. Frontiers Media S.A. 2023-03-23 /pmc/articles/PMC10076574/ /pubmed/37035750 http://dx.doi.org/10.3389/fgene.2023.1093163 Text en Copyright © 2023 Wang, Bi, Luo, Wang, Ismtula and Guo. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Wang, Yiyang Bi, Xiaojuan Luo, Zhiwen Wang, Haiyan Ismtula, Dilimulati Guo, Chenming Gelsolin: A comprehensive pan-cancer analysis of potential prognosis, diagnostic, and immune biomarkers |
title | Gelsolin: A comprehensive pan-cancer analysis of potential prognosis, diagnostic, and immune biomarkers |
title_full | Gelsolin: A comprehensive pan-cancer analysis of potential prognosis, diagnostic, and immune biomarkers |
title_fullStr | Gelsolin: A comprehensive pan-cancer analysis of potential prognosis, diagnostic, and immune biomarkers |
title_full_unstemmed | Gelsolin: A comprehensive pan-cancer analysis of potential prognosis, diagnostic, and immune biomarkers |
title_short | Gelsolin: A comprehensive pan-cancer analysis of potential prognosis, diagnostic, and immune biomarkers |
title_sort | gelsolin: a comprehensive pan-cancer analysis of potential prognosis, diagnostic, and immune biomarkers |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10076574/ https://www.ncbi.nlm.nih.gov/pubmed/37035750 http://dx.doi.org/10.3389/fgene.2023.1093163 |
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