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Quantification of diversity sampling bias resulting from rice root bacterial isolation on popular and nitrogen-free culture media using 16S amplicon barcoding

Culturing bacteria from plant material is well known to be conducive to strong bias compared to the actual diversity in the original samples. This bias is related to the bacterial cultivability, chemical composition of the media and culture conditions. Recovery bias is often observed but has never b...

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Detalles Bibliográficos
Autores principales: Sondo, Moussa, Wonni, Issa, Klonowska, Agnieszka, Koïta, Kadidia, Moulin, Lionel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10079111/
https://www.ncbi.nlm.nih.gov/pubmed/37023002
http://dx.doi.org/10.1371/journal.pone.0279049