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Using machine learning to predict lymph node metastasis in patients with renal cell carcinoma: A population-based study
BACKGROUND: Lymph node (LN) metastasis is strongly associated with distant metastasis of renal cell carcinoma (RCC) and indicates an adverse prognosis. Accurate LN-status prediction is essential for individualized treatment of patients with RCC and to help physicians make appropriate surgical decisi...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10080072/ https://www.ncbi.nlm.nih.gov/pubmed/37033061 http://dx.doi.org/10.3389/fpubh.2023.1104931 |
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author | Zhang, Yuhan Yi, Xinglin Tang, Zhe Xie, Pan Yin, Na Deng, Qiumiao Zhu, Lin Luo, Hu Peng, Kanfu |
author_facet | Zhang, Yuhan Yi, Xinglin Tang, Zhe Xie, Pan Yin, Na Deng, Qiumiao Zhu, Lin Luo, Hu Peng, Kanfu |
author_sort | Zhang, Yuhan |
collection | PubMed |
description | BACKGROUND: Lymph node (LN) metastasis is strongly associated with distant metastasis of renal cell carcinoma (RCC) and indicates an adverse prognosis. Accurate LN-status prediction is essential for individualized treatment of patients with RCC and to help physicians make appropriate surgical decisions. Thus, a prediction model to assess the hazard index of LN metastasis in patients with RCC is needed. METHODS: Partial data were extracted from the Surveillance, Epidemiology, and End Results (SEER) database. Data of 492 individuals with RCC, collected from the Southwest Hospital in Chongqing, China, were used for external validation. Eight indicators of risk of LN metastasis were screened out. Six machine learning (ML) classifiers were established and tuned, focused on predicting LN metastasis in patients with RCC. The models were integrated with big data analytics and ML algorithms. Based on the optimal model, we developed an online risk calculator and plotted overall survival using Kaplan–Meier analysis. RESULTS: The extreme gradient-boosting (XGB) model was superior to the other models in both internal and external trials. The area under the curve, accuracy, sensitivity, and specificity were 0.930, 0.857, 0.856, and 0.873, respectively, in the internal test and 0.958, 0.935, 0.769, and 0.944, respectively, in the external test. These parameters show that XGB has an excellent ability for clinical application. The survival analysis showed that patients with predicted N1 tumors had significantly shorter survival (p < 0.0001). CONCLUSION: Our study shows that integrating ML algorithms and clinical data can effectively predict LN metastasis in patients with confirmed RCC. Subsequently, a freely available online calculator (https://xinglinyi.shinyapps.io/20221004-app/) was built, based on the XGB model. |
format | Online Article Text |
id | pubmed-10080072 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-100800722023-04-08 Using machine learning to predict lymph node metastasis in patients with renal cell carcinoma: A population-based study Zhang, Yuhan Yi, Xinglin Tang, Zhe Xie, Pan Yin, Na Deng, Qiumiao Zhu, Lin Luo, Hu Peng, Kanfu Front Public Health Public Health BACKGROUND: Lymph node (LN) metastasis is strongly associated with distant metastasis of renal cell carcinoma (RCC) and indicates an adverse prognosis. Accurate LN-status prediction is essential for individualized treatment of patients with RCC and to help physicians make appropriate surgical decisions. Thus, a prediction model to assess the hazard index of LN metastasis in patients with RCC is needed. METHODS: Partial data were extracted from the Surveillance, Epidemiology, and End Results (SEER) database. Data of 492 individuals with RCC, collected from the Southwest Hospital in Chongqing, China, were used for external validation. Eight indicators of risk of LN metastasis were screened out. Six machine learning (ML) classifiers were established and tuned, focused on predicting LN metastasis in patients with RCC. The models were integrated with big data analytics and ML algorithms. Based on the optimal model, we developed an online risk calculator and plotted overall survival using Kaplan–Meier analysis. RESULTS: The extreme gradient-boosting (XGB) model was superior to the other models in both internal and external trials. The area under the curve, accuracy, sensitivity, and specificity were 0.930, 0.857, 0.856, and 0.873, respectively, in the internal test and 0.958, 0.935, 0.769, and 0.944, respectively, in the external test. These parameters show that XGB has an excellent ability for clinical application. The survival analysis showed that patients with predicted N1 tumors had significantly shorter survival (p < 0.0001). CONCLUSION: Our study shows that integrating ML algorithms and clinical data can effectively predict LN metastasis in patients with confirmed RCC. Subsequently, a freely available online calculator (https://xinglinyi.shinyapps.io/20221004-app/) was built, based on the XGB model. Frontiers Media S.A. 2023-03-24 /pmc/articles/PMC10080072/ /pubmed/37033061 http://dx.doi.org/10.3389/fpubh.2023.1104931 Text en Copyright © 2023 Zhang, Yi, Tang, Xie, Yin, Deng, Zhu, Luo and Peng. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Public Health Zhang, Yuhan Yi, Xinglin Tang, Zhe Xie, Pan Yin, Na Deng, Qiumiao Zhu, Lin Luo, Hu Peng, Kanfu Using machine learning to predict lymph node metastasis in patients with renal cell carcinoma: A population-based study |
title | Using machine learning to predict lymph node metastasis in patients with renal cell carcinoma: A population-based study |
title_full | Using machine learning to predict lymph node metastasis in patients with renal cell carcinoma: A population-based study |
title_fullStr | Using machine learning to predict lymph node metastasis in patients with renal cell carcinoma: A population-based study |
title_full_unstemmed | Using machine learning to predict lymph node metastasis in patients with renal cell carcinoma: A population-based study |
title_short | Using machine learning to predict lymph node metastasis in patients with renal cell carcinoma: A population-based study |
title_sort | using machine learning to predict lymph node metastasis in patients with renal cell carcinoma: a population-based study |
topic | Public Health |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10080072/ https://www.ncbi.nlm.nih.gov/pubmed/37033061 http://dx.doi.org/10.3389/fpubh.2023.1104931 |
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